Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272462	Bat2	HLA-B associated transcript 2	17	17 19.04 cM	53761
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	BAT2[HLA-B associated transcript 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGAGGAGC (2) TAAAAAAAAA (3) 50.6 0.0506 Cb medulloblastoma GGTGTGTTGT TAAAAAAAAA (3) 108.7 0.1087 P8 GC+1d culture AAGGGGAAAG (4) GGTGACTGAT (2) GGTGTGTTGT TAAAAAAAAA (3) 77.6 0.0776 P8 GC+SHH+1d culture AAGGGGAAAG (4) GGTGTGTTGT TAAAAAAAAA (3) 101.9 0.1019 3T3 fibroblasts AAGGGGAAAG (4) CAGGAGGAGC (2) GGTGACTGAT (2) TAAAAAAAAA (3) 24.5 0.0245 E15 cortex AAGGGGAAAG (4) GCAGGCCTCA TAAAAAAAAA (3) 19.7 0.0197 P1 cortex AAGGGGAAAG (4) GCCTGCAGAG (2) GGTGACTGAT (2) TAAAAAAAAA (3) 68.1 0.0681 Hypothalamus CAGGAGGAGC (2) GACAGACAGT GGTGTGTTGT TAAAAAAAAA (3) 38 0.038 E12.5 retina AAGGGGAAAG (4) CAGGTGGGGG (2) CTTGGCTCCT TAAAAAAAAA (3) 30.1 0.0301 E14.5 retina AAGGGGAAAG (4) CAGGAGGAGC (2) TAAAAAAAAA (3) 45.5 0.0455 E16.5 retina CAGGTGGGGG (2) GACAGACAGT GCAGGCCTCA GCCTGCAGAG (2) GGTGTGTTGT TAAAAAAAAA (3) 34.3 0.0343 E18.5 retina AAGGGGAAAG (4) CAGGAGGAGC (2) GGTGTGTTGT TAAAAAAAAA (3) 116.3 0.1163 P0.5 retina AAGGGGAAAG (4) GCCTGCAGAG (2) TAAAAAAAAA (3) 47.2 0.0472 P2.5 retina CAGGTGGGGG (2) CGTCGGTCTT GCCTGCAGAG (2) GGTGTGTTGT TAAAAAAAAA (3) 81.1 0.0811 P4.5 retina AAGGGGAAAG (4) CAGGTGGGGG (2) GACAGACAGT TAAAAAAAAA (3) 128.8 0.1288 P6.5 retina AAGGGGAAAG (4) GGTGTGTTGT TAAAAAAAAA (3) 70.1 0.0701 P10.5 crx- retina CTTGGCTCCT TAAAAAAAAA (3) 11.2 0.0112 P10.5 crx+ retina CGTCGGTCTT GCAGGCCTCA GGTGACTGAT (2) GGTGTGTTGT TAAAAAAAAA (3) 38.4 0.0384 Adult retinal AAGGGGAAAG (4) GCCTGCAGAG (2) GGTGTGTTGT TAAAAAAAAA (3) 31.5 0.0315 ONL AAGGGGAAAG (4) TAAAAAAAAA (3) 32.5 0.0325