Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272548	Etnk1	ethanolamine kinase 1	6	6 74.0 cM	75320
Mm.272548	1700126G02Rik	RIKEN cDNA 1700126G02 gene	6		76648
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGAAAGTT (3) AACTTGCAAT (2) GAACAAATCT TAGCAGACAG TTTTCAAATA (2) 8 0.008 Cb medulloblastoma AAAGAAAGTT (3) AACAGAGAAT (2) AACTTGCAAT (2) CTGTTTCCTG GAACAAATTT (2) TAGCAGACAG TGATTCCAGA (2) TTTTCAAATA (2) 23 0.023 P8 GC+1d culture AAAGAAAGTT (3) AACTTGCAAT (2) GAACAAATTT (2) TAGCAGACAG TTTTCAAATA (2) TTTTCCAATA 14.7 0.0147 P8 GC+SHH+1d culture AAAGAAAGTT (3) AACTTGCAAT (2) CTGTTTCCTG GAACAAATCT GCCATTTTCA (5) TAGCAGACAG 23.4 0.0234 3T3 fibroblasts CTGTTTCCTG 7 0.007 E15 cortex AAAGAAAGTT (3) AACTTGCAAT (2) CTGTTTCCTG 14.7 0.0147 P1 cortex AAAGAAAGTT (3) AACTTGCAAT (2) TAGCAGACAG 13.5 0.0135 Hypothalamus AAAGAAAGTT (3) AACTTGCAAT (2) GAACAAATTT (2) TAGCAGACAG 18.1 0.0181 E12.5 retina CTGTTTCCTG TAGCAGACAG 9.4 0.0094 E14.5 retina AAAGAAAGTT (3) CTGTTTCCTG TAGCAGACAG TGATTCCAGA (2) 16.3 0.0163 E16.5 retina AAAGAAAGTT (3) AACTTGCAAT (2) CTGTTTCCTG GAACAAATCT TAGCAGACAG TGATTCCAGA (2) 32.6 0.0326 E18.5 retina AAAGAAAGTT (3) AACTTGCAAT (2) GAACAAATCT TAGCAGACAG 25.4 0.0254 P0.5 retina AACTTGCAAT (2) TAGCAGACAG TGATTCCAGA (2) 6 0.006 P2.5 retina AAAGAAAGTT (3) AACAGAGAAT (2) GAACAAATCT TAGCAGACAG 12.4 0.0124 P4.5 retina AAAGAAAGTT (3) AACTTGCAAT (2) TAGCAGACAG TTTTCAAATA (2) TTTTCCAATA 15.9 0.0159 P6.5 retina AAAGAAAGTT (3) AACTTGCAAT (2) CTGTTTCCTG TAGCAGACAG TGATTCCAGA (2) TTTTCAAATA (2) 18.4 0.0184 P10.5 crx- retina AAAGAAAGTT (3) AACTTGCAAT (2) CTGTTTCCTG GAACAAATCT TAGCAGACAG TTTTCCAATA 29.8 0.0298 P10.5 crx+ retina AAAGAAAGTT (3) AACTTGCAAT (2) TAGCAGACAG TTTTCAAATA (2) 32.7 0.0327 Adult retinal TAGCAGACAG 1.9 0.0019 ONL AAAGAAAGTT (3) AACAGAGAAT (2) AACTTGCAAT (2) TAGCAGACAG 15.3 0.0153