| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACTAACTCGT (2) TTGCATTCCA
| 3.2 | 0.0032 |
| Cb medulloblastoma | ATACACCAGA CTCTGACCAG (3) TTGCATTCCA
| 16.1 | 0.0161 |
| P8 GC+1d culture | ATACACCAGA CTCTGACCAG (3) TGCCTTATAT (2) TTGCATTCCA
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | ACTAACTCGT (2) GCGGCAGCGG (2) TGCCTTATAT (2) TTGCATTCCA
| 7 | 0.007 |
| 3T3 fibroblasts | ATACACCAGA
| 10.5 | 0.0105 |
| E15 cortex | CTCTGACCAG (3)
| 4.9 | 0.0049 |
| P1 cortex | ATACACCAGA
| 4.5 | 0.0045 |
| Hypothalamus | ATACACCAGA TGCCTTATAT (2) TTGCATTCCA
| 12.6 | 0.0126 |
| E12.5 retina | ACTAACTCGT (2) CTCTGACCAG (3)
| 7.6 | 0.0076 |
| E14.5 retina | ACTAACTCGT (2) ATACACCAGA
| 7.3 | 0.0073 |
| E16.5 retina | ATACACCAGA CTCTGACCAG (3) GCGGCAGCGG (2)
| 5.4 | 0.0054 |
| E18.5 retina | ACTAACTCGT (2) TTGCATTCCA
| 7.3 | 0.0073 |
| P0.5 retina | ACTAACTCGT (2) CTCTGACCAG (3)
| 5.9 | 0.0059 |
| P2.5 retina | ACTAACTCGT (2) CTCTGACCAG (3) TTGCATTCCA
| 10.6 | 0.0106 |
| P4.5 retina | ACTAACTCGT (2) CTCTGACCAG (3) TTGCATTCCA
| 13.9 | 0.0139 |
| P6.5 retina | ACTAACTCGT (2) CTCTGACCAG (3) TGCCTTATAT (2) TTGCATTCCA
| 10 | 0.01 |
| P10.5 crx- retina | ATACACCAGA
| 3.7 | 0.0037 |
| P10.5 crx+ retina | ACTAACTCGT (2) ATACACCAGA CTCTGACCAG (3) GCGGCAGCGG (2) TTGCATTCCA
| 11.4 | 0.0114 |
| Adult retinal | CTCTGACCAG (3) TTGCATTCCA
| 3.8 | 0.0038 |
| ONL | TTGCATTCCA
| 1.9 | 0.0019 |