Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272866	Hmox2	heme oxygenase (decycling) 2	16	16 2.6 cM	15369
Mm.272866	2700048O17Rik	RIKEN cDNA 2700048O17 gene	16		72582
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGGGAAGG (2) CAGAAAAAAG GATGGGGAAA (2) GGGGACTTTT TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) 110.8 0.1108 Cb medulloblastoma CTACAAAAAA GGGGACTTTT TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) TTTGAACTTA (2) 164.1 0.1641 P8 GC+1d culture AGCCAAGTAC (2) ATGGGGAAGG (2) CTACAAAAAA GATGGGGAAA (2) GGGGACTTTT GTGGACAATG TGCCAATAAA (2) TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) TTTGAACTTA (2) 104.8 0.1048 P8 GC+SHH+1d culture ATGGGGAAGG (2) CAGAAAAAAG CTACAAAAAA GATGGGGAAA (2) GGGGACTTTT TGCCAATAAA (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) TTTGAACTTA (2) 131.2 0.1312 3T3 fibroblasts TGGTTGCTGG TGTGTGTGTG (2) 248.8 0.2488 E15 cortex GATGGGGAAA (2) GGGGACTTTT TGGTTGCCGG (2) TGGTTGCTGG 301.7 0.3017 P1 cortex GTGGACAATG TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) 118.2 0.1182 Hypothalamus ATGGGGAAGG (2) CAACAGAGAA (2) TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) 387.6 0.3876 E12.5 retina ATGGGGAAGG (2) CTACAAAAAA GATGGGGAAA (2) GGGGACTTTT GTGGACAATG TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TGTTTGCATC (2) TTGTTTGCAT (4) 219.8 0.2198 E14.5 retina ATGGGGAAGG (2) GATGGGGAAA (2) GGGGACTTTT TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TGTTTGCATC (2) TTGTTTGCAT (4) 1009.3 1.0093 E16.5 retina GATGGGGAAA (2) TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) 827.5 0.8275 E18.5 retina CTACAAAAAA TGCCAATAAA (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) 307.3 0.3073 P0.5 retina CTACAAAAAA GATGGGGAAA (2) GGGGACTTTT GTGGACAATG TGGTTGCTGG TGTGTGTGTG (2) 221.9 0.2219 P2.5 retina ATGGGGAAGG (2) CTACAAAAAA GATGGGGAAA (2) GGGGACTTTT TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) TTTGAACTTA (2) 216.6 0.2166 P4.5 retina ATGGGGAAGG (2) GATGGGGAAA (2) GGGGACTTTT TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) TTTGAACTTA (2) 212.2 0.2122 P6.5 retina CTACAAAAAA GATGGGGAAA (2) GGGGACTTTT TGGTTGCTGG TGTGTGTGTG (2) TGTTTGCATC (2) 205.2 0.2052 P10.5 crx- retina GTGGACAATG TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) TTTGAACTTA (2) 354.8 0.3548 P10.5 crx+ retina ATGGGGAAGG (2) CTACAAAAAA GGGGACTTTT GTGGACAATG TGCCAATAAA (2) TGGTTGCCGG (2) TGGTTGCTGG TGTGTGTGTG (2) TTGTTTGCAT (4) 167.1 0.1671 Adult retinal AGCCAAGTAC (2) ATGGGGAAGG (2) GGGGACTTTT GTGGACAATG TGGTTGCTGG TGTGTGTGTG (2) TGTTTGCATC (2) TTGTTTGCAT (4) 281.7 0.2817 ONL AGCCAAGTAC (2) GATGGGGAAA (2) TGGTTGCTGG TGTGTGTGTG (2) 425.2 0.4252