Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273098	Agrn	agrin	4	4 E2 (4 80.0 cM)	11603
Gene Ontology	acetylcholine receptor regulator activity | extracellular space | neurotransmitter receptor metabolism | plasma membrane organization and biogenesis | synaptic transmission
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

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SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAAGTC AAATAAAGTT (2) GAGGTGGTGG (4) 13.1 0.0131 Cb medulloblastoma AAATAAAGTC AACTGGGTCT (2) 11.5 0.0115 P8 GC+1d culture AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) CAGCTCCCTC (2) GCTTGTGACT GGGAGTGCAT (2) 25.1 0.0251 P8 GC+SHH+1d culture AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) GCGGGGGCCA GCTCAGCCCC GGGAGTGCAT (2) 24.6 0.0246 3T3 fibroblasts AACTGGGTCT (2) ATCAACCTCA GAGGTGGTGG (4) GCTCAGCCCC 17.5 0.0175 E15 cortex AACTGGGTCT (2) GAGGTGGTGG (4) 9.8 0.0098 P1 cortex AAATAAAGTC AACTGGGTCT (2) ATCAACCTCA 22.7 0.0227 Hypothalamus AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) GCGGGGGCCA GCTCAGCCCC GGGAGTGCAT (2) 27.1 0.0271 E12.5 retina AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) ATCAACCTCA GCTCAGCCCC 32 0.032 E14.5 retina AAATAAAGTC AACTGGGTCT (2) CAGCTCCCTC (2) 47.3 0.0473 E16.5 retina AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) CAGCTCCCTC (2) GGGGCTCAAA 56 0.056 E18.5 retina AAATAAAGTC AACTGGGTCT (2) GGGGCTCAAA 45.4 0.0454 P0.5 retina AAATAAAGTC AACTGGGTCT (2) GGGGCTCAAA 25.5 0.0255 P2.5 retina AAATAAAGTC CAGCTCCCTC (2) GCGGGGGCCA GCTTGTGACT GGGAGTGCAT (2) 35.4 0.0354 P4.5 retina AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) ATCAACCTCA CAGCTCCCTC (2) GGGAGTGCAT (2) 49.6 0.0496 P6.5 retina AAATAAAGTC AAATAAAGTT (2) CAGCTCCCTC (2) GCGGGGGCCA GCTTGTGACT GGGAGTGCAT (2) GGGGCTCAAA 56.8 0.0568 P10.5 crx- retina AAATAAAGTC AACTGGGTCT (2) CAGCTCCCTC (2) GGGAGTGCAT (2) 31.6 0.0316 P10.5 crx+ retina AAATAAAGTC AAATAAAGTT (2) AACTGGGTCT (2) CAGCTCCCTC (2) GGGAGTGCAT (2) GGGGCTCAAA 30.7 0.0307 Adult retinal AAATAAAGTC AACTGGGTCT (2) GCGGGGGCCA GCTCAGCCCC GGGAGTGCAT (2) GGGGCTCAAA 27.9 0.0279 ONL AAATAAAGTT (2) AACTGGGTCT (2) GGGAGTGCAT (2) GGGGCTCAAA 32.5 0.0325