| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AATGAATGAC AGCGACAGCG (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 262.7 | 0.2627 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAAGAAAC AATGAATGAC GCCCCCAGGC (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 920.3 | 0.9203 |
| P8 GC+1d culture | AAAAAAAAAA (2) ACTTCCATAT (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 284.2 | 0.2842 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAAGAAAC GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 385.3 | 0.3853 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 52.5 | 0.0525 |
| E15 cortex | AAAAAAAAAA (2) ACTTCCATAT (2) AGCGACAGCG (2) GCCCCCAGGC (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 247.2 | 0.2472 |
| P1 cortex | AAAAAAAAAA (2) ACTTCCATAT (2) AGCGACAGCG (2) TAAAAAAAAA (3) TCCTTTGTGC
| 313.5 | 0.3135 |
| Hypothalamus | AAAAAAAAAA (2) AATGAATGAC GCCTTGGTTT TAAAAAAAAA (3)
| 164.8 | 0.1648 |
| E12.5 retina | AAAAAAAAAA (2) ACTTCCATAT (2) AGCGACAGCG (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 180.2 | 0.1802 |
| E14.5 retina | AAAAAAAAAA (2) AATGAATGAC CAGGACAAGG (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 145.6 | 0.1456 |
| E16.5 retina | AAAAAAAAAA (2) AGCGACAGCG (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 74.2 | 0.0742 |
| E18.5 retina | AAAAAAAAAA (2) AGCGACAGCG (2) GCCTTGGTTT TAAAAAAAAA (3)
| 489.2 | 0.4892 |
| P0.5 retina | AAAAAAAAAA (2) CAGGACAAGG (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 167 | 0.167 |
| P2.5 retina | AAAAAAAAAA (2) TAAAAAAAAA (3) TCCTTTGTGC
| 406.6 | 0.4066 |
| P4.5 retina | AAAAAAAAAA (2) ACTTCCATAT (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 421.9 | 0.4219 |
| P6.5 retina | AAAAAAAAAA (2) AAAAAGAAAC GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 338.6 | 0.3386 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAAAAGAAAC AATGAATGAC GCCCCCAGGC (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 81.9 | 0.0819 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 138.4 | 0.1384 |
| Adult retinal | AAAAAAAAAA (2) AGCGACAGCG (2) CAGGACAAGG (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 92.7 | 0.0927 |
| ONL | AAAAAAAAAA (2) GCCTTGGTTT TAAAAAAAAA (3) TCCTTTGTGC
| 145.5 | 0.1455 |