Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273403	Cox5a	cytochrome c oxidase, subunit Va	9	11 56.0 cM	12858
Gene Ontology	cytochrome-c oxidase activity | electron transport | inner membrane | mitochondrion | oxidoreductase activity | respiratory chain complex IV (sensu Eukarya)
Human Homolog	COX5A[cytochrome c oxidase subunit Va]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACTGCCGTC (2) TAATAGTAAC 26.1 0.0261 Cb medulloblastoma CTCGCAATGC (5) TAATAGTAAC TGATAGTAAC 67 0.067 P8 GC+1d culture GAAATAATAA GTTTGATACT TAAATAAGTA TAATAGTAAC 37.6 0.0376 P8 GC+SHH+1d culture CACTGCCGTC (2) GAAATAATAA GTTTGATACT TAAATAAGTA TAATAGTAAC 55.1 0.0551 3T3 fibroblasts CACTGCCGTC (2) GACACCGAGA (3) GTTTGATACT 10.5 0.0105 P1 cortex TAATAGTAAC 18.2 0.0182 Hypothalamus CACTGCCGTC (2) CTCGCAATGC (5) GAAATAATAA GTTTGATACT TAAATAAGTA TAATAGTAAC TAATTGTAAC 85 0.085 E12.5 retina TAATAGTAAC TAATAGTAAT 20.7 0.0207 E14.5 retina TAATAGTAAC 31 0.031 E16.5 retina CTCGCAATGC (5) GAAATAATAA GACACCGAGA (3) GTTTGATACT TAATAGTAAC TGATAGTAAC 32.5 0.0325 E18.5 retina GTTTGATACT TAATAGTAAC TAGACGGTTA 65.4 0.0654 P0.5 retina CACTGCCGTC (2) GTTTGATACT TAATAGAACT TAATAGTAAC 15.8 0.0158 P2.5 retina GAAATAATAA TAATAGTAAC TAATAGTAAT TGATAGTAAC 28.3 0.0283 P4.5 retina GAAATAATAA GTTTGATACT TAAATAAGTA TAATAGTAAC 31.8 0.0318 P6.5 retina TAAATAAGTA TAATAGTAAC 28.4 0.0284 P10.5 crx- retina GAAATAATAA TAATAGTAAC TAGACGGTTA 18.7 0.0187 P10.5 crx+ retina CACTGCCGTC (2) GAAATAATAA TAATAGTAAC 19.2 0.0192 Adult retinal TAATAGTAAC 11.1 0.0111 ONL GAAATAATAA TAATAGAACT TAATAGTAAC TAGACGGTTA 19.1 0.0191