Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273538	Tubb5	tubulin, beta 5	17	17 B1	22154
Gene Ontology	microtubule | microtubule-based process | structural constituent of cytoskeleton
Human Homolog	OK/SW-cl.56[beta 5-tubulin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 273 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATACCTTT (2) AACGACCTCG AAGGAGGTGG (2) AGGGAAATCG CTCCTCCTGC (3) GAAAGCACTC (2) GACGAGATGG GCACCCCTGT GCAGGCACTC GCAGGCATTC (2) GGCACCCTGC GGCACCTGCT GGGCAGAGGT TGCACCCTGC TGCCAGGCAC 765.1 0.7651 Cb medulloblastoma GAAAGCACTC (2) GACGAGATGG GCAGGCACCC (2) GCAGGCACTC GCAGGCATTC (2) TGCCAGGCAC TGTGCTTCTA 99.3 0.0993 P8 GC+1d culture AACGACCTCG AAGGAGGTGG (2) AGGGAAATCG CCAGAGCCAG CCCTCACCCG (2) CTCCTCCTGC (3) GAAAGCACTC (2) GCACCCCTGT GCAGGCACCC (2) GCAGGCACTC GCAGGCATTC (2) GGCACCTGCT GGGCAGAGGT GTGAACACTG TGCACCCTGC TGCCAGGCAC TGTGGCTTGG (3) 530.5 0.5305 P8 GC+SHH+1d culture AACGACCTCG ATTCCTTCAG (2) CCAGAGCCAG CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCAAGCACTC GCACCCCTGT GCAGGCACCC (2) GCAGGCACTC GCATCGACCC GGGCAGAGGT GGGGGGGTAA TGCACCCTGC TGCCAGGCAC 692.2 0.6922 3T3 fibroblasts CCAGAGCCAG CCTGGCTTGC CTCCTCCTGC (3) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACTC GCAGGGCACT GGCCCACAAC GGGCAGAGGT TGCACCCTGC TGCCAGGCAC 248.7 0.2487 E15 cortex AGGGAAATCG CTCCTCCTGC (3) GAAAGGGAGG (3) GACGAGATGG GCAAGCACTC GCAGGCACCC (2) GCAGGCACTC GGGAAAGGGG GGGCAGAGGT TGCACCCTGC TGCCAGGCAC TGTGCTTCTA 558.9 0.5589 P1 cortex AAATACCTTT (2) AACGACCTCG AAGGACGGTG (3) AAGGAGGTGG (2) CCTGGCTTGC CTCCTCCTGC (3) GCAGGCACTC GCAGGCATTC (2) GGCACCTGCT GGGCAGAGGT TGCACCCTGC TGCCAGGCAC 295.2 0.2952 Hypothalamus AACGACCTCG CCAGAGCCAG GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACTC GGCACCTGCT GTATGCACTC (2) TGCACCCTGC TGCCAGGCAC 161 0.161 E12.5 retina AACGACCTCG CCCTCACCCG (2) CCTGGCTTTG (3) CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCAGGCACTC GCAGGCCCTC (2) GGGAAAGGGG GGGCAGAGGT GTATGCACTC (2) GTGAACACTG TGCACCCTGC TGCCAGGCAC TTTGTGCAAG 734.4 0.7344 E14.5 retina AACGACCTCG AAGGAGGTGG (2) CCAGAGCCAG CCCTCACCCG (2) CCTGGCTTTG (3) CTCCTCCTGC (3) GAAAGCACTC (2) GAAAGGGAGG (3) GACGAGATGG GCACCCCTGT GCAGGCACTC GCAGGCCCTC (2) GTATGCACTC (2) TGCACCCTGC TGCCAGGCAC TGTGCTTCTA TTGCTCTCCG 768.6 0.7686 E16.5 retina AAATACCTTT (2) AACGACCTCG AAGGAGGTGG (2) AGGGAAATCG ATGGCCGCCT ATTCCTTCAG (2) CCAGAGCCAG CCCTCACCCG (2) CCTGGCTTTG (3) CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GACGAGATGG GCACCCCTGT GCAGGCACTC GCAGGCATTC (2) GCATCGACCC GGCACCTGCT GGGAAAGGGG GTATGCACTC (2) TGCACCCTGC TGCCAGGCAC TGTGGCTTGG (3) TTGCTCTCCG 813.1 0.8131 E18.5 retina AACGACCTCG ATGGCCGCCT CCTGGCTTTG (3) CTCCTCCTGC (3) GAAAGCACTC (2) GACGAGATGG GCACCCCTGT GCAGGCACTC GCAGGCCCTC (2) GGCCCACAAC GGGCAGAGGT GTATGCACTC (2) TGCACCCTGC TGCCAGGCAC 911.2 0.9112 P0.5 retina AACGACCTCG AAGGAGGTGG (2) ATGGCCGCCT CCAGAGCCAG CCCTCACCCG (2) CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACCC (2) GCAGGCACTC GGCACCTGCT TGCCAGGCAC 443.7 0.4437 P2.5 retina AACGACCTCG ATTCCTTCAG (2) CCAGAGCCAG CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACTC GCAGGCATTC (2) GCAGGCCCTC (2) GGGCAGAGGT GTGAACACTG TGCACCCTGC TGCCAGGCAC TGTGGCTTGG (3) 514.2 0.5142 P4.5 retina AAACCATCTC CAGAAATGAT CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACTC GCAGGCCCTC (2) GCAGGGCACT TGCACCCTGC TGCCAGGCAC TTTGTGCAAG 370.7 0.3707 P6.5 retina AAATACCTTT (2) CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GACGAGATGG GCACCCCTGT GCAGGCACTC GGCACCCTGC TGCACCCTGC TGCCAGGCAC 266.9 0.2669 P10.5 crx- retina AAACCATCTC AACGACCTCG CAGAAATGAT CCCTCACCCG (2) GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACCC (2) GCAGGCACTC GCAGGCATTC (2) GCAGGGCACT GGGCAGAGGT TGCACCCTGC TGCCAGGCAC 180.5 0.1805 P10.5 crx+ retina AAATACCTTT (2) CAGAAATGAT CCCTCACCCG (2) CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACCC (2) GCAGGCACTC GGCACCTGCT TGCCAGGCAC 442 0.442 Adult retinal GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACTC GCAGGCCCTC (2) GGGGGGGTAA GTATGCACTC (2) TGCACCCTGC TGCCAGGCAC TTTGTGCAAG 89.1 0.0891 ONL AAATACCTTT (2) AAGGAGGTGG (2) CCTGGCTTGC CTCCTCCTGC (3) GAAACAGCAA GAAAGCACTC (2) GAAAGGGAGG (3) GCACCCCTGT GCAGGCACTC GTATGCACTC (2) TGCCAGGCAC 110.9 0.1109