Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27365	Fath	fat tumor suppressor homolog (Drosophila)	8	8 25.0 cM	14107
Gene Ontology	actin filament organization | calcium ion binding | cell junction | cell-cell adhesion | establishment and/or maintenance of cell polarity | filopodium | lamellipodium | protein binding
Human Homolog	FAT[FAT tumor suppressor homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGCAGCAG (3) TCCAGTAACA TCTTATTAAA (2) 16.3 0.0163 Cb medulloblastoma CCTGCAGCAG (3) 6.9 0.0069 P8 GC+1d culture CCTGCAGCAG (3) TCTTATTAAA (2) TTTTATTAAA (2) 14.8 0.0148 P8 GC+SHH+1d culture CCTGCAGCAG (3) TATTTATATA (3) TCTTATTAAA (2) TTTTATTAAA (2) 20 0.02 3T3 fibroblasts CCTGCAGCAG (3) TCCAGTAACA 7 0.007 E15 cortex CCTGCAGCAG (3) 4.9 0.0049 P1 cortex TATTTATATA (3) TTTTATTAAA (2) 13.6 0.0136 Hypothalamus CCTGCAGCAG (3) 9.1 0.0091 E12.5 retina TCTTATTAAA (2) TTTTATTAAA (2) 9.4 0.0094 E14.5 retina CCTGCAGCAG (3) TCTTATTAAA (2) TTGACTTTTT TTTTATTAAA (2) 10.9 0.0109 E16.5 retina CCTGCAGCAG (3) TATTTATATA (3) TCCAGTAACA TTTTATTAAA (2) 18.1 0.0181 E18.5 retina CCTGCAGCAG (3) GAAACAGGCT (2) TATTTATATA (3) TCCAGTAACA TTTTATTAAA (2) 18.1 0.0181 P0.5 retina ATCCCTGGTA CCTGCAGCAG (3) 7.9 0.0079 P2.5 retina CCTGCAGCAG (3) GAAACAGGCT (2) TCCAGTAACA TTTTATTAAA (2) 19.5 0.0195 P4.5 retina GAAACAGGCT (2) TCTTATTAAA (2) TTTTATTAAA (2) 13.9 0.0139 P6.5 retina GAAACAGGCT (2) TTGACTTTTT TTTTATTAAA (2) 8.4 0.0084 P10.5 crx- retina CCTGCAGCAG (3) TTTTATTAAA (2) 20.5 0.0205 P10.5 crx+ retina CCTGCAGCAG (3) GAAACAGGCT (2) TATTTATATA (3) TCCAGTAACA TTTTATTAAA (2) 30.7 0.0307 Adult retinal ATCCCTGGTA CCTGCAGCAG (3) GAAACAGGCT (2) TTGACTTTTT 13.1 0.0131 ONL ATCCCTGGTA CCTGCAGCAG (3) TTGACTTTTT 5.7 0.0057