Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.273986
D4Bwg0951e
DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed
4
4 42.6 cM
52829
Mm.273986
9430051O21Rik
RIKEN cDNA 9430051O21 gene
4
77339
Mm.273986
2010003D24Rik
RIKEN cDNA 2010003D24 gene
4
76725
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAGACCTTA (
2
)
4.9
0.0049
Cb medulloblastoma
CCCGGCCAGA
TAAGACCTTA (
2
)
6.9
0.0069
P8 GC+1d culture
CCCGGCCAGA
GGACTGGTGT
(
3
)
TAAGACCTTA (
2
)
5.6
0.0056
P8 GC+SHH+1d culture
CCCGGCCAGA
GGACTGGTGT
(
3
)
TAAGACCTTA (
2
)
7
0.007
3T3 fibroblasts
GGACTGGTGT
(
3
)
3.5
0.0035
E15 cortex
CCCGGCCAGA
GGACTGGTGT
(
3
)
14.8
0.0148
Hypothalamus
TAAGACCTTA (
2
)
5.4
0.0054
E14.5 retina
GGACTGGTGT
(
3
)
TAAGACCTTA (
2
)
5.4
0.0054
E16.5 retina
TAAGACCTTA (
2
)
1.8
0.0018
E18.5 retina
TAAGACCTTA (
2
)
1.8
0.0018
P0.5 retina
CCCGGCCAGA
TAAGACCTTA (
2
)
4
0.004
P4.5 retina
TAAGACCTTA (
2
)
5.9
0.0059
P6.5 retina
GGACTGGTGT
(
3
)
1.7
0.0017
P10.5 crx- retina
GGACTGGTGT
(
3
)
TAAGACCTTA (
2
)
11.2
0.0112
P10.5 crx+ retina
GGACTGGTGT
(
3
)
5.8
0.0058
Adult retinal
CCCGGCCAGA
GGACTGGTGT
(
3
)
TAAGACCTTA (
2
)
7.5
0.0075
ONL
CCCGGCCAGA
GGACTGGTGT
(
3
)
TAAGACCTTA (
2
)
7.6
0.0076
