Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274146	Pcbp1	poly(rC) binding protein 1	6		23983
Gene Ontology	DNA binding | mRNA processing | nucleic acid binding | nucleus | ribonucleoprotein complex | RNA binding | translation activator activity
Human Homolog	PCBP1[poly(rC) binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCAAAAAA (2) AGCCAAAAAA (4) GATTTTATTT (2) 32.6 0.0326 Cb medulloblastoma AACTCACCAT (2) AGCCAAAAAA (4) ATCCAACTGT CCGGCCAGCT (2) GATTTTATTT (2) 53.2 0.0532 P8 GC+1d culture AACCAAAAAA (2) AGCCAAAAAA (4) ATCCAACTGT GATTTCATTT (2) GATTTTATTT (2) GGAATTTTTT (2) 32.9 0.0329 P8 GC+SHH+1d culture AACCAAAAAA (2) AGCCAAAAAA (4) GATTTTATTT (2) GGAATTTTTT (2) GGATTTTATT (2) 60.8 0.0608 E15 cortex AGCCAAAAAA (4) ATCCAACTGT GAGATTTTAT GATTTTATTT (2) 24.6 0.0246 P1 cortex AACCAAAAAA (2) CCGGCCAGCT (2) GATTTTATTT (2) GATTTTTTTT (3) 22.6 0.0226 Hypothalamus AACCAAAAAA (2) ATCCAACTGT GATTTTATTT (2) 18.1 0.0181 E12.5 retina AACCAAAAAA (2) AGCCAAAAAA (4) GATTTTATTT (2) 15.1 0.0151 E14.5 retina AACCAAAAAA (2) AACTCACCAT (2) AGCCAAAAAA (4) ATCCAACTGT GAGATTTTAT GATTTTATTT (2) GGATTTTATT (2) 38.3 0.0383 E16.5 retina AACCAAAAAA (2) AACTCACCAT (2) AGCCAAAAAA (4) CCGGCCAGCT (2) GATTTTATTT (2) GGATTTTATT (2) 21.7 0.0217 E18.5 retina AACCAAAAAA (2) AGCCAAAAAA (4) GAGATTTTAT GATTTTATTT (2) 52.8 0.0528 P0.5 retina AACCAAAAAA (2) AGCCAAAAAA (4) GATTTTATTT (2) 17.7 0.0177 P2.5 retina AACCAAAAAA (2) AGCCAAAAAA (4) ATCCAACTGT GATTTTATTT (2) GGATTTTATT (2) 24.7 0.0247 P4.5 retina AACCAAAAAA (2) GATTTTATTT (2) 21.8 0.0218 P6.5 retina AACCAAAAAA (2) AGCCAAAAAA (4) GATTTTATTT (2) GGATTTTATT (2) 21.7 0.0217 P10.5 crx- retina AACCAAAAAA (2) AGCCAAAAAA (4) ATCCAACTGT GATTTTATTT (2) 29.7 0.0297 P10.5 crx+ retina AGCCAAAAAA (4) GATTTTATTT (2) GATTTTTTTT (3) GGATTTTATT (2) 13.4 0.0134 Adult retinal AACCAAAAAA (2) AGCCAAAAAA (4) ATCCAACTGT GATTTCATTT (2) GATTTTATTT (2) 18.6 0.0186 ONL AACCAAAAAA (2) AGCCAAAAAA (4) ATCCAACTGT GATTTTATTT (2) GGATTTTATT (2) 21 0.021