Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274285	Opa1	optic atrophy 1 homolog (human)	16	16 21.5 cM	74143
Mm.274285	D630050H08Rik	RIKEN cDNA D630050H08 gene	16		106170
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCTGTATTC (2) CTGCACACAG (2) TCGTCACTGT (2) 40.8 0.0408 Cb medulloblastoma TCGTCACTGT (2) 6.9 0.0069 P8 GC+1d culture AAAGAAAGCT (3) CGCTGTATTC (2) CTGCACACAG (2) TCGTCACTGT (2) 14.7 0.0147 P8 GC+SHH+1d culture ATGGGCAGAC (2) CGCTGTATTC (2) CTGCACACAG (2) TCGTCACTGT (2) 38.7 0.0387 3T3 fibroblasts CAGGATTCAG (2) CGCTGTATTC (2) 10.5 0.0105 E15 cortex AAAGAAAGCT (3) CGCTGTATTC (2) TCGTCACTGT (2) 19.7 0.0197 P1 cortex TCGTCACTGT (2) 18.2 0.0182 Hypothalamus GCAATTTGAT TCGTCACTGT (2) 3.6 0.0036 E12.5 retina AAAGAAAGCT (3) CGCTGTATTC (2) GCAATTTGAT GGTGTGATGA (2) TCTGTAGTTC (2) 26.4 0.0264 E14.5 retina CGCTGTATTC (2) CTGCACACAG (2) GCATTCCAGC (2) TCGTCACTGT (2) 34.6 0.0346 E16.5 retina CGCTGTATTC (2) 36.2 0.0362 E18.5 retina CGCTGTATTC (2) GCAATTTGAT TCGTCACTGT (2) 18.2 0.0182 P0.5 retina CGCTGTATTC (2) GCAATTTGAT TCGTCACTGT (2) 17.6 0.0176 P2.5 retina CGCTGTATTC (2) GCAATTTGAT TCGTCACTGT (2) TCTGTAGTTC (2) 21.1 0.0211 P4.5 retina CGCTGTATTC (2) GCAATTTGAT 6 0.006 P6.5 retina CAGGATTCAG (2) CGCTGTATTC (2) GCAATTTGAT GGTGTGATGA (2) TCGTCACTGT (2) 11.7 0.0117 P10.5 crx- retina TCGTCACTGT (2) 5.6 0.0056 P10.5 crx+ retina CTGCACACAG (2) GCAATTTGAT TCGTCACTGT (2) TCTGTAGTTC (2) 15.3 0.0153 Adult retinal CTGCACACAG (2) GGTGTGATGA (2) TCGTCACTGT (2) 11.1 0.0111 ONL CGCTGTATTC (2) TCGTCACTGT (2) TCTGTAGTTC (2) 11.5 0.0115