| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGATCAAGA GCCCCCTGCC (2) GCCCCTGCGC (3) GGGTTTGGAG
| 31 | 0.031 |
| Cb medulloblastoma | GAGCCACAGA GCCCCCTGCC (2) GCCCCTGCGC (3) GGGTTTGGAG
| 13.8 | 0.0138 |
| P8 GC+1d culture | GAGATCAAGA GCCCCCTGCC (2) GCCCCTGCGC (3) GGGTTTGGAG GTGCAGCAAT (2) TGGCAGGGAC (2)
| 55.8 | 0.0558 |
| P8 GC+SHH+1d culture | GAGCCCACAG GCCCCTGCGC (3) GGGTTTGGAG TGGCAGGGAC (2) TTTGTAAGCA
| 30.4 | 0.0304 |
| 3T3 fibroblasts | GAGCCCACAG GCCCCCTGCC (2) GTGCAGCAAT (2)
| 31.5 | 0.0315 |
| P1 cortex | GAGATCAAGA GCCCCTGCGC (3) GTGCAGCAAT (2)
| 13.5 | 0.0135 |
| Hypothalamus | GGAAGCCCAA (2) GGGTTTGGAG
| 5.4 | 0.0054 |
| E12.5 retina | GAGCCACAGA GCCCCTGCGC (3) GGAAGCCCAA (2) GGGTTTGGAG GTGCAGCAAT (2)
| 15.1 | 0.0151 |
| E14.5 retina | GCCCCTGCGC (3) TGGCAGGGAC (2)
| 5.4 | 0.0054 |
| E16.5 retina | GCCCCCTGCC (2) GCCCCTGCGC (3) GGGTTTGGAG GTGCAGCAAT (2)
| 10.8 | 0.0108 |
| E18.5 retina | GCCCCTGCGC (3) GGGTTTGGAG
| 16.4 | 0.0164 |
| P0.5 retina | GAGCCCACAG GCCCCTGCGC (3) GGAAGCCCAA (2) GGGTTTGGAG TGGCAGGGAC (2)
| 21.7 | 0.0217 |
| P2.5 retina | GCCCCCTGCC (2) GCCCCTGCGC (3) GGAAGCCCAA (2) GGGTTTGGAG
| 21.1 | 0.0211 |
| P4.5 retina | GAGCCCACAG GCCCCCTGCC (2) GCCCCTGCGC (3) GGGTTTGGAG TGGCAGGGAC (2) TTTGTAAGCA
| 33.7 | 0.0337 |
| P6.5 retina | GAGCCCACAG
| 3.3 | 0.0033 |
| P10.5 crx- retina | GAGCCCACAG GCCCCTGCGC (3) GGGTTTGGAG TTTGTAAGCA
| 11.3 | 0.0113 |
| P10.5 crx+ retina | GCCCCTGCGC (3) GGAAGCCCAA (2) TTTGTAAGCA
| 9.5 | 0.0095 |
| Adult retinal | GCCCCCTGCC (2) GCCCCTGCGC (3)
| 13 | 0.013 |
| ONL | GAGCCACAGA GAGCCCACAG GCCCCTGCGC (3) GGGTTTGGAG
| 13.3 | 0.0133 |