| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGCCTGAGGC (3) TATGTGTGTG
| 22.8 | 0.0228 |
| Cb medulloblastoma | GGCCTGAGGC (3) TTTCTTGGGC (2)
| 30 | 0.03 |
| P8 GC+1d culture | CCTTTAAACC (2) GGCCTGAGGC (3) TATGTGTGTG
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | CCTTTAAACC (2) GGCCTGAGGC (3) TATGTGTGTG
| 23.5 | 0.0235 |
| 3T3 fibroblasts | CCTTTAAACC (2) GGCCTGAGGC (3) TATGTGTGTG
| 31.5 | 0.0315 |
| E15 cortex | CCTTTAAACC (2) GGCCTGAGGC (3)
| 19.7 | 0.0197 |
| P1 cortex | TATGTGTGTG
| 9.1 | 0.0091 |
| Hypothalamus | CCTTTAAACC (2) GGCCTGAGGC (3) TTTCTTGGGC (2)
| 27.1 | 0.0271 |
| E12.5 retina | CCTTTAAACC (2) GGCCTGAGGC (3) TATGTGTGTG TTTCTTGGGC (2)
| 33.9 | 0.0339 |
| E14.5 retina | GGCCTGAGGC (3) TTGTGTGCCC TTTCTTGGGC (2)
| 29.1 | 0.0291 |
| E16.5 retina | GGCCTGAGGC (3) TTTCTTGGGC (2)
| 29 | 0.029 |
| E18.5 retina | GGCCTGAGGC (3) TTTCTTGGGC (2)
| 18.2 | 0.0182 |
| P0.5 retina | CCTTAAACCC (2) CCTTTAAACC (2) GGCCTGAGGC (3) TATGTGTGTG TTTCTTGGGC (2)
| 27.6 | 0.0276 |
| P2.5 retina | GGCCTGAGGC (3) TATGTGTGTG
| 28.2 | 0.0282 |
| P4.5 retina | CCTTTAAACC (2) GGCCTGAGGC (3) TTTCTTGGGC (2)
| 31.7 | 0.0317 |
| P6.5 retina | CCTTTAAACC (2) GGCCTGAGGC (3) TTTCTTGGGC (2)
| 48.4 | 0.0484 |
| P10.5 crx- retina | CCTTAAACCC (2) GGCCTGAGGC (3) TATGTGTGTG TTGTGTGCCC TTTCTTGGGC (2)
| 28 | 0.028 |
| P10.5 crx+ retina | GGCCTGAGGC (3) TATGTGTGTG
| 19.2 | 0.0192 |
| Adult retinal | GGCCTGAGGC (3) TATGTGTGTG
| 13 | 0.013 |
| ONL | GGCCTGAGGC (3)
| 7.7 | 0.0077 |