Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274787	Pogz	pogo transposable element with ZNF domain	3		229584
Gene Ontology	development | nucleic acid binding | nucleus | zinc ion binding
Human Homolog	POGZ[pogo transposable element with ZNF domain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAACTTTGC CAAACACCGT (3) CAGGAGGAGC (2) GTGATAAACC (3) TATTTATTGA (2) TTAACAATAG TTAAGTGTTG (2) 14.6 0.0146 Cb medulloblastoma GTGATAAACC (3) TATTTATTGA (2) TTAACAATAG TTAAGTGTTG (2) 11.5 0.0115 P8 GC+1d culture AGAACTTTGC CAAACACCGT (3) GGAGAAAAAT (2) GTGATAAACC (3) TATTTATTGA (2) TTAACAATAG TTAAGTGTTG (2) 14.7 0.0147 P8 GC+SHH+1d culture AGAACTTTGC CAAACACCGT (3) CACAAGCGGT CCCGCCTGGT GGAGAAAAAT (2) GTGATAAACC (3) TATTTATTGA (2) TTAAGTGTTG (2) 23.5 0.0235 3T3 fibroblasts CAAACACCGT (3) CAGGAGGAGC (2) 14 0.014 E15 cortex GGAGAAAAAT (2) 4.9 0.0049 P1 cortex GGAGAAAAAT (2) 4.5 0.0045 Hypothalamus AGAACTTTGC CAGGAGGAGC (2) GCATTGGAGA (3) TGGGTGATGG TTAACAATAG TTAAGTGTTG (2) 19.8 0.0198 E12.5 retina GGAGAAAAAT (2) GTGATAAACC (3) TATTTATTGA (2) TTAAGTGTTG (2) 15 0.015 E14.5 retina AGAACTTTGC CACAAGCGGT CAGGAGGAGC (2) GGAGAAAAAT (2) TATTTATTGA (2) TTAAGTGTTG (2) 18.1 0.0181 E16.5 retina AGAACTTTGC ATCTTTAAAA GCATTGGAGA (3) GTGATAAACC (3) TATTTATTGA (2) TTAAGTGTTG (2) 18 0.018 E18.5 retina AAAACTTGCT CAGGAGGAGC (2) TATTTATTGA (2) TGGGTGATGG TTAACAATAG 12.7 0.0127 P0.5 retina AGAACTTTGC GTGATAAACC (3) TTAACAATAG TTAAGTGTTG (2) 11.8 0.0118 P2.5 retina AGAACTTTGC CCCGCCTGGT GCATTGGAGA (3) TATTTATTGA (2) TGGGTGATGG TTAAGTGTTG (2) 23 0.023 P4.5 retina AGAACTTTGC CACAAGCGGT GTGATAAACC (3) TATTTATTGA (2) TGGGTGATGG TTAAGTGTTG (2) 23.9 0.0239 P6.5 retina AAAACTTGCT AGAACTTTGC GGAGAAAAAT (2) GTGATAAACC (3) TATTTATTGA (2) 16.8 0.0168 P10.5 crx- retina ATCTTTAAAA CAAACACCGT (3) GTGATAAACC (3) TGGGTGATGG TTAACAATAG 11.3 0.0113 P10.5 crx+ retina AGAACTTTGC TATTTATTGA (2) TTAAGTGTTG (2) 5.7 0.0057 Adult retinal AGAACTTTGC CAAACACCGT (3) CACAAGCGGT TGGGTGATGG TTAAGTGTTG (2) 16.8 0.0168 ONL AAAACTTGCT CCCGCCTGGT GTGATAAACC (3) TTAAGTGTTG (2) 11.4 0.0114