Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27499	5033425B17Rik	RIKEN cDNA 5033425B17 gene	7		69804
Gene Ontology	integral to membrane
Human Homolog	NIFIE14[seven transmembrane domain protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) TGCCGCCTGT (3) 24.5 0.0245 Cb medulloblastoma GAGACCTTCG (3) GAGACCTTCT (3) 11.5 0.0115 P8 GC+1d culture ACAAAGGCCT ACTTCAATGG ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) TGCCGCCTGT (3) 22.6 0.0226 P8 GC+SHH+1d culture ACTTCAATGG ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) GGAGACCCTT TGCCGCCTGT (3) 32.9 0.0329 3T3 fibroblasts GAGACCTTCG (3) TGCCGCCTGT (3) 17.5 0.0175 E15 cortex ATTAAAGCCC (2) GAGACCTTCG (3) GAGTGAGCTG TGCCGCCTGT (3) 24.6 0.0246 P1 cortex ACAAAGGCCT ATTAAAGCCC (2) GAGACCTTCG (3) 22.7 0.0227 Hypothalamus ATTAAAGCCC (2) GAGACCTTCG (3) 9 0.009 E12.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) GGAGACCCTT TGCCGCCTGT (3) 30.1 0.0301 E14.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) TGCCGCCTGT (3) 27.2 0.0272 E16.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) TGCCGCCTGT (3) 23.5 0.0235 E18.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) 14.5 0.0145 P0.5 retina ACAAAGGCCT ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) GAGTGAGCTG 23.7 0.0237 P2.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) TGCCGCCTGT (3) 29.9 0.0299 P4.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) TGCCGCCTGT (3) 11.9 0.0119 P6.5 retina ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) GAGTGAGCTG GGAGACCCTT 21.7 0.0217 P10.5 crx- retina ATTAAAGCCC (2) GAGACCTTCG (3) GAGTGAGCTG 14.9 0.0149 P10.5 crx+ retina ATTAAAGCCC (2) GAGACCTTCG (3) GAGACCTTCT (3) TGCCGCCTGT (3) 15.3 0.0153 Adult retinal ACTTCAATGG ATTAAAGCCC (2) GAGACCTTCG (3) 11.2 0.0112 ONL ATTAAAGCCC (2) GGAGACCCTT 5.7 0.0057