Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275195	Ubr1	ubiquitin protein ligase E3 component n-recognin 1	2	2 67.4 cM	22222
Gene Ontology	intracellular | ligase activity | protein binding | protein biosynthesis | ribosome | structural constituent of ribosome | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin ligase complex | ubiquitin-dependent protein catabolism | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity | ubiquitin-protein ligase activity
Human Homolog	UBR1[ubiquitin protein ligase E3 component n-recognin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAAAATAT (2) ATGAAGTTAT 8.2 0.0082 Cb medulloblastoma AGCAAAATAT (2) ATGAAGTTAT TAAACATCTT (2) 6.9 0.0069 P8 GC+1d culture AGCAAAATAT (2) ATGAAGTTAT TAAACATCTT (2) TCTTTAATCC (2) 12.5 0.0125 P8 GC+SHH+1d culture AGCAAAATAT (2) ATGAAGTTAT TAAACATCTT (2) TCTTTAATCC (2) 16.4 0.0164 3T3 fibroblasts TCTTTAATCC (2) 7 0.007 E15 cortex TCTTTAATCC (2) 4.9 0.0049 P1 cortex TCTTTAATCC (2) 9.1 0.0091 Hypothalamus GGGGGTCACA 3.6 0.0036 E12.5 retina AGCAAAATAT (2) TTGCAGTCAC 5.7 0.0057 E14.5 retina ATGAAGTTAT TCTTTAATCC (2) 25.5 0.0255 E16.5 retina ATGAAGTTAT TCTTTAATCC (2) TTGCAGTCAC 16.3 0.0163 E18.5 retina ATGAAGTTAT TCTTTAATCC (2) 3.6 0.0036 P0.5 retina AGCAAAATAT (2) GGGGGTCACA TCTTTAATCC (2) 7.9 0.0079 P2.5 retina AGCAAAATAT (2) ATGAAGTTAT TCTTTAATCC (2) TTGCAGTCAC 8.9 0.0089 P4.5 retina ATGAAGTTAT TAAACATCTT (2) TCTTTAATCC (2) 15.9 0.0159 P6.5 retina AGCAAAATAT (2) TAAACATCTT (2) 3.4 0.0034 P10.5 crx- retina AGCAAAATAT (2) ATGAAGTTAT TCTTTAATCC (2) TTGCAGTCAC 18.6 0.0186 P10.5 crx+ retina TAAACATCTT (2) TCTTTAATCC (2) 3.8 0.0038 Adult retinal AGCAAAATAT (2) ATGAAGTTAT GGGGGTCACA TAAACATCTT (2) TCTTTAATCC (2) 16.8 0.0168 ONL ATGAAGTTAT TCTTTAATCC (2) 17.2 0.0172