| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACGCCCGGG CTTAAAAAAA (2) GTCTTAGATG TTGCCTTCCC
| 6.4 | 0.0064 |
| Cb medulloblastoma | CACGCCCGGG CTTAAAAAAA (2) GTGTTACATT TTGCCTTCCC
| 16.1 | 0.0161 |
| P8 GC+1d culture | ACTGCATCAG CACGCCCGCG CACGCCCGGG CTTAAAAAAA (2) GTCTTAGATG GTGTTACATT TGGGAAGATC (2) TTGCCTTCCC
| 29.6 | 0.0296 |
| P8 GC+SHH+1d culture | ACTGCATCAG CACGCCCGCG CACGCCCGGG CTTAAAAAAA (2) GTCTTAGATG GTGTTACATT TTGCCTTCCC
| 18.8 | 0.0188 |
| 3T3 fibroblasts | CACGCCCGGG TTGCCTTCCC
| 24.5 | 0.0245 |
| E15 cortex | CACGCCCGGG GTGTTACATT
| 9.8 | 0.0098 |
| P1 cortex | GTCTTAGATG TTGCCTTCCC
| 9 | 0.009 |
| Hypothalamus | CACGCCCGCG CTTAAAAAAA (2) GTGTTACATT TGGGAAGATC (2) TTGCCTTCCC
| 27.1 | 0.0271 |
| E12.5 retina | ACTGCATCAG CTTAAAAAAA (2) TTGCCTTCCC
| 11.3 | 0.0113 |
| E14.5 retina | AACCCAGACT (2) ACTGCATCAG CTTAAAAAAA (2) GTGTTACATT TTGCCTTCCC
| 27.3 | 0.0273 |
| E16.5 retina | ACTGCATCAG CTTAAAAAAA (2) GTCTTAGATG GTGTTACATT TTGCCTTCCC
| 14.4 | 0.0144 |
| E18.5 retina | ACTGCATCAG CTTAAAAAAA (2) GTGTTACATT TTGCCTTCCC
| 12.7 | 0.0127 |
| P0.5 retina | AACCCAGACT (2) CACGCCCGGG CTTAAAAAAA (2) TTGCCTTCCC
| 21.7 | 0.0217 |
| P2.5 retina | CACGCCCGCG CTTAAAAAAA (2) GTCTTAGATG TTGCCTTCCC
| 24.7 | 0.0247 |
| P4.5 retina | CTTAAAAAAA (2) GTGTTACATT TTGCCTTCCC
| 6 | 0.006 |
| P6.5 retina | CTTAAAAAAA (2) GTCTTAGATG TTGCCTTCCC
| 8.3 | 0.0083 |
| P10.5 crx- retina | CACGCCCGCG CTTAAAAAAA (2) GTCTTAGATG GTGTTACATT TTGCCTTCCC
| 18.7 | 0.0187 |
| P10.5 crx+ retina | ACTGCATCAG CACGCCCGGG CTTAAAAAAA (2) GTCTTAGATG GTGTTACATT TTGCCTTCCC
| 19.1 | 0.0191 |
| Adult retinal | CACGCCCGCG CACGCCCGGG CTTAAAAAAA (2) GTCTTAGATG GTGTTACATT TTGCCTTCCC
| 26.1 | 0.0261 |
| ONL | AACCCAGACT (2) CACGCCCGGG GTGTTACATT
| 7.6 | 0.0076 |