Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275639	Glrb	glycine receptor, beta subunit	3	3 36.0 cM	14658
Gene Ontology	chloride transport | endonuclease activity | extracellular ligand-gated ion channel activity | extracellular space | glycine-gated chloride channel activity | integral to membrane | ion channel activity | ion transport | membrane | neurotransmitter receptor activity | postsynaptic membrane | receptor activity | RNA-directed DNA polymerase activity | synaptic transmission | transferase activity | transport
Human Homolog	GLRB[glycine receptor, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATAAGTGCT (5) TTTTTTTTTT (2) 8.2 0.0082 Cb medulloblastoma AACTTGAAAT GTGGGGTCAA TATAAGTGCT (5) TCTGAAGAAA TTTTTTTTTT (2) 16.1 0.0161 P8 GC+1d culture AACTTGAAAT CCTGCTGCTC (4) CCTTTCATTG TATAAGTGCT (5) TTTTTTTTTT (2) 28.5 0.0285 P8 GC+SHH+1d culture AACTTGAAAT CCTGCTGCTC (4) TATAAGTGCT (5) TTTTTTTTTT (2) 15.2 0.0152 3T3 fibroblasts CTGCTGCTCC (2) 3.5 0.0035 E15 cortex CTGCTGCTCC (2) TTTTTTTTTT (2) 9.8 0.0098 P1 cortex GTGGGGTCAA TTTTTTTTTT (2) 9 0.009 Hypothalamus AACTTGAAAT TTTTTTTTTT (2) 9 0.009 E12.5 retina CCTGCTGCTC (4) TTTTTTTTTT (2) 13.1 0.0131 E14.5 retina CCTTTCATTG TTTTTTTTTT (2) 25.5 0.0255 E16.5 retina CCTGCTGCTC (4) TTTTTTTTTT (2) 10.8 0.0108 E18.5 retina CCTGCTGCTC (4) TTTTTTTTTT (2) 12.7 0.0127 P0.5 retina CTGCTGCTCC (2) TATAAGTGCT (5) TTTTTTTTTT (2) 13.8 0.0138 P2.5 retina TATAAGTGCT (5) TTTTTTTTTT (2) 12.3 0.0123 P4.5 retina CCTGCTGCTC (4) TTTTTTTTTT (2) 13.9 0.0139 P6.5 retina CCTGCTGCTC (4) CCTTTCATTG TATAAGTGCT (5) TTTTTTTTTT (2) 15 0.015 P10.5 crx- retina AACTTGAAAT CCTGCTGCTC (4) TATAAGTGCT (5) 9.3 0.0093 P10.5 crx+ retina AACTTGAAAT CCTGCTGCTC (4) GTGGGGTCAA TTTTTTTTTT (2) 15.3 0.0153 Adult retinal AACTTGAAAT CCTGCTGCTC (4) TATAAGTGCT (5) TTTTTTTTTT (2) 20.4 0.0204 ONL TCTGAAGAAA TTTTTTTTTT (2) 7.6 0.0076