| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TATTTTACCT (2) TGGTTGCTTC (4) TGTGTGTGTG (2)
| 37.5 | 0.0375 |
| Cb medulloblastoma | CCATTTTAAT (3) TATTTTACCT (2) TGTGTGTGTG (2)
| 34.7 | 0.0347 |
| P8 GC+1d culture | TATTTTACCT (2) TGTGTGTGTG (2)
| 33.1 | 0.0331 |
| P8 GC+SHH+1d culture | CCATTTTAAT (3) TATTTTACCT (2) TGTGTGTGTG (2)
| 32.7 | 0.0327 |
| 3T3 fibroblasts | TGGTTGCTTC (4) TGTGTGTGTG (2)
| 31.5 | 0.0315 |
| P1 cortex | TGTGTGTGTG (2)
| 18.2 | 0.0182 |
| Hypothalamus | CCATTTTAAT (3) GGGGCCCAAG (2) TATTTTACCT (2) TGTGTGTGTG (2)
| 39.8 | 0.0398 |
| E12.5 retina | CCATTTTAAT (3) TGTGTGTGTG (2)
| 45.1 | 0.0451 |
| E14.5 retina | TATTTTACCT (2) TGTGTGTGTG (2)
| 58.3 | 0.0583 |
| E16.5 retina | TATTTTACCT (2) TGTGTGTGTG (2)
| 43.4 | 0.0434 |
| E18.5 retina | TATTTTACCT (2) TGGTTGCTTC (4) TGTGTGTGTG (2)
| 56.4 | 0.0564 |
| P0.5 retina | TGTGTGTGTG (2)
| 21.6 | 0.0216 |
| P2.5 retina | TATTTTACCT (2) TGTGTGTGTG (2)
| 37 | 0.037 |
| P4.5 retina | TATTTTACCT (2) TGTGTGTGTG (2)
| 49.6 | 0.0496 |
| P6.5 retina | TGTGTGTGTG (2)
| 41.7 | 0.0417 |
| P10.5 crx- retina | CCATTTTAAT (3) TATTTTACCT (2) TGTGTGTGTG (2)
| 63.2 | 0.0632 |
| P10.5 crx+ retina | TATTTTACCT (2) TGTGTGTGTG (2)
| 48 | 0.048 |
| Adult retinal | TGTGTGTGTG (2)
| 53.7 | 0.0537 |
| ONL | TATTTTACCT (2) TGTGTGTGTG (2)
| 24.9 | 0.0249 |