| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 60.3 | 0.0603 |
| Cb medulloblastoma | AAGAATGCTT (2) CAAAAAAAAA (2) GGACCCATTG GGAGCCATTG (3)
| 129.4 | 0.1294 |
| P8 GC+1d culture | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3) TTTAGGAAAG
| 58.2 | 0.0582 |
| P8 GC+SHH+1d culture | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3) TTTAGGAAAG
| 83.1 | 0.0831 |
| 3T3 fibroblasts | GGAGCCATTG (3)
| 56.1 | 0.0561 |
| E15 cortex | CAAAAAAAAA (2) GGAGCCATTG (3)
| 44.5 | 0.0445 |
| P1 cortex | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 45.4 | 0.0454 |
| Hypothalamus | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 85.1 | 0.0851 |
| E12.5 retina | CAAAAAAAAA (2) GGAGCCATTG (3)
| 41.3 | 0.0413 |
| E14.5 retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 29.2 | 0.0292 |
| E16.5 retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 20 | 0.02 |
| E18.5 retina | CAAAAAAAAA (2) GGAGCCATTG (3)
| 52.7 | 0.0527 |
| P0.5 retina | CAAAAAAAAA (2) GGAGCCATTG (3)
| 151.1 | 0.1511 |
| P2.5 retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 77.5 | 0.0775 |
| P4.5 retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 67.4 | 0.0674 |
| P6.5 retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3) TTTAGGAAAG
| 70 | 0.07 |
| P10.5 crx- retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 61.3 | 0.0613 |
| P10.5 crx+ retina | AAGAATGCTT (2) CAAAAAAAAA (2) GGACCCATTG GGAGCCATTG (3) TTTAGGAAAG
| 82.6 | 0.0826 |
| Adult retinal | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 40.8 | 0.0408 |
| ONL | AAGAATGCTT (2) CAAAAAAAAA (2) GGAGCCATTG (3)
| 44 | 0.044 |