| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAACGTCAC (2) GCCTCCAAGA GGTTAGCTGT TGGGAAGGAA
| 9.8 | 0.0098 |
| Cb medulloblastoma | GAAACGTCAC (2) GCCTCCAAGA TGGGAAGGAA TGTGTGGAGG
| 9.2 | 0.0092 |
| P8 GC+1d culture | CCTGCTGTTA GCTTTAGCCT (3) GGTTAGCTGT TGGGAAGGAA
| 10.2 | 0.0102 |
| P8 GC+SHH+1d culture | GAGGCCCTCT GCTGTGGGCT (4) GCTTTAGCCT (3) GGTTAGCTGT GTGGGGAAAG (2) TGGGAAGGAA
| 13 | 0.013 |
| 3T3 fibroblasts | GCTGTGGGCT (4) GCTTTAGCCT (3) GGTTAGCTGT
| 10.5 | 0.0105 |
| Hypothalamus | GGTTAGCTGT TGGGAAGGAA
| 5.4 | 0.0054 |
| E12.5 retina | GGTTAGCTGT GTGGGGAAAG (2) TGGGAAGGAA
| 7.6 | 0.0076 |
| E14.5 retina | GCTTTAGCCT (3) GGTTAGCTGT
| 3.6 | 0.0036 |
| E16.5 retina | GGTTAGCTGT TGGGGAAGGG (3)
| 5.4 | 0.0054 |
| E18.5 retina | GAGGCCCTCT GGTTAGCTGT TGGGGAAGGG (3)
| 5.4 | 0.0054 |
| P0.5 retina | CCTGCTGTTA GGTTAGCTGT TGGGGAAGGG (3)
| 6 | 0.006 |
| P2.5 retina | GCTGTGGGCT (4) GCTTTAGCCT (3) GGTTAGCTGT
| 7.1 | 0.0071 |
| P4.5 retina | GAGGCCCTCT GGTTAGCTGT TGGGAAGGAA
| 6 | 0.006 |
| P6.5 retina | GCCTCCAAGA GCTTTAGCCT (3) GGTTAGCTGT
| 10.1 | 0.0101 |
| P10.5 crx- retina | CCTGCTGTTA GCTTTAGCCT (3) GGTTAGCTGT
| 5.7 | 0.0057 |
| Adult retinal | CCTGCTGTTA GAAACGTCAC (2) GCCTCCAAGA GGTTAGCTGT GTGGGGAAAG (2) TGTGTGGAGG
| 16.9 | 0.0169 |
| ONL | GGTTAGCTGT GTGGGGAAAG (2) TGGGAAGGAA
| 11.5 | 0.0115 |