Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275852	Hectd1	HECT domain containing 1	12		207304
Gene Ontology	ligase activity
Human Homolog	HECTD1[HECT domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGAGCGCT ATTTTTTTTT (4) CACACCCTTG CCTTTAATCC (3) TGGAACAGTA 62 0.062 Cb medulloblastoma CACACCCTTG CCTTTAATCC (3) GTGATCACCG (2) 50.8 0.0508 P8 GC+1d culture ATTTTTTTTT (4) CACACCCTTG CCTTTAATCC (3) GTGATCACCG (2) TGGAACAGTA 36.4 0.0364 P8 GC+SHH+1d culture ATTTTTTTTT (4) CACACGCTTG CCTTTAATCC (3) GTGATCACCG (2) 31.7 0.0317 3T3 fibroblasts CACACCCTTG CCTTTAATCC (3) 80.6 0.0806 E15 cortex CCTTTAATCC (3) GTGATCACCG (2) 64.3 0.0643 P1 cortex ATTTTTTTTT (4) CACACCCTTG CCTTTAATCC (3) 163.5 0.1635 Hypothalamus CACACCCTTG CCTTTAATCC (3) TCAGGCTGAA TGGGTGATGG 28.9 0.0289 E12.5 retina CACACCCTTG CACACGCTTG CCTTTAATCC (3) 80.8 0.0808 E14.5 retina ATTTTTTTTT (4) CCTTTAATCC (3) 122.1 0.1221 E16.5 retina AGAGAGCGCT CACACGCTTG CCTTTAATCC (3) 72.4 0.0724 E18.5 retina ATTTTTTTTT (4) CACACGCTTG CCTTTAATCC (3) GTGATCACCG (2) TGGGTGATGG 30.8 0.0308 P0.5 retina ATTTTTTTTT (4) CACACCCTTG CCTTTAATCC (3) 86.3 0.0863 P2.5 retina ATTTTTTTTT (4) CACACCCTTG CACACGCTTG CCTTTAATCC (3) TGGGTGATGG 86.3 0.0863 P4.5 retina ATTTTTTTTT (4) CACACCCTTG CCTTTAATCC (3) TGGGTGATGG 59.5 0.0595 P6.5 retina CACACCCTTG CCTTTAATCC (3) GTGATCACCG (2) 75 0.075 P10.5 crx- retina AGAGAGCGCT CACACCCTTG CCTTTAATCC (3) GTGATCACCG (2) TGGGTGATGG 76.2 0.0762 P10.5 crx+ retina CACACCCTTG CCTTTAATCC (3) TCAGGCTGAA TGGAACAGTA 48 0.048 Adult retinal CACACCCTTG CCTTTAATCC (3) TGGGTGATGG 133.4 0.1334 ONL CACACCCTTG CCTTTAATCC (3) TCAGGCTGAA TGGAACAGTA 93.8 0.0938