| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGCTTGTGGC (2) TGGATGGTGG (2)
| 4.9 | 0.0049 |
| P8 GC+1d culture | CCACTTTTGA (2) TGCTTGTGGC (2)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | CCACTTTTGA (2)
| 1.2 | 0.0012 |
| 3T3 fibroblasts | TGGATGGTGG (2)
| 3.5 | 0.0035 |
| E15 cortex | TGGATGGTGG (2)
| 4.9 | 0.0049 |
| P1 cortex | GTTTCTCAGA (2) TGGATGGTGG (2)
| 13.6 | 0.0136 |
| E12.5 retina | CAACATTAGA GTTTCTCAGA (2)
| 3.8 | 0.0038 |
| E14.5 retina | AAGCTTTCTC (3) CCACTTTTGA (2) TGCTTGTGGC (2)
| 5.4 | 0.0054 |
| E16.5 retina | GGGGAGGGAG
| 1.8 | 0.0018 |
| E18.5 retina | GGGGAGGGAG
| 1.8 | 0.0018 |
| P0.5 retina | CCACTTTTGA (2)
| 3.9 | 0.0039 |
| P2.5 retina | CCACTTTTGA (2) TGCTTGTGGC (2)
| 3.6 | 0.0036 |
| P4.5 retina | CCACTTTTGA (2)
| 5.9 | 0.0059 |
| P6.5 retina | CAACATTAGA TGGATGGTGG (2)
| 3.4 | 0.0034 |
| P10.5 crx- retina | AAGCTTTCTC (3) CCACTTTTGA (2) GGGGAGGGAG TGCTTGTGGC (2)
| 11.3 | 0.0113 |
| P10.5 crx+ retina | AAGCTTTCTC (3) TGGATGGTGG (2)
| 3.8 | 0.0038 |
| Adult retinal | CCACTTTTGA (2)
| 1.9 | 0.0019 |
| ONL | CAACATTAGA CCACTTTTGA (2) GTTTCTCAGA (2)
| 11.4 | 0.0114 |