| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTTGCCCAGG (2) GGGGGAGCAT (4)
| 6.6 | 0.0066 |
| Cb medulloblastoma | CCCTGAATAA (4) CTTGCCCAGG (2) GGGGGAGCAT (4)
| 11.5 | 0.0115 |
| P8 GC+1d culture | CCCTGAATAA (4) GGGGGAGCAT (4)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | CCCTGAATAA (4) CCTTTCATCC (2) GGGGGAGCAT (4)
| 7.1 | 0.0071 |
| P1 cortex | CTTGCCCAGG (2)
| 4.5 | 0.0045 |
| Hypothalamus | CCTTTCATCC (2) GGGGGAGCAT (4)
| 5.4 | 0.0054 |
| E12.5 retina | CTTGCCCAGG (2) GGGGGAGCAT (4) TCTCTGGTGC
| 5.7 | 0.0057 |
| E14.5 retina | CCCTGAATAA (4) CCTTTCATCC (2) GGGGGAGCAT (4)
| 7.2 | 0.0072 |
| E16.5 retina | CCCTGAATAA (4) CCTTTCATCC (2) GGGGGAGCAT (4) TCTCTGGTGC
| 7.2 | 0.0072 |
| E18.5 retina | CCCTGAATAA (4) GGGGGAGCAT (4)
| 5.4 | 0.0054 |
| P0.5 retina | CTTGCCCAGG (2)
| 2 | 0.002 |
| P2.5 retina | CCCTGAATAA (4) GGGGGAGCAT (4) TCTCTGGTGC
| 7.1 | 0.0071 |
| P4.5 retina | CTTGCCCAGG (2) GGGGGAGCAT (4)
| 6 | 0.006 |
| P6.5 retina | GGGGGAGCAT (4)
| 1.7 | 0.0017 |
| P10.5 crx- retina | CCCTGAATAA (4)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | CCCTGAATAA (4) CCTTTCATCC (2) GGGGGAGCAT (4)
| 9.6 | 0.0096 |
| Adult retinal | CCCTGAATAA (4)
| 7.4 | 0.0074 |
| ONL | CCCTGAATAA (4) CTTGCCCAGG (2)
| 5.7 | 0.0057 |