| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGACATTGGT TTTTTTTTTT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | CAGAGTGCTG (2) TTTTTTTTTT (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | AGACATTGGT AGGTGGTTGT (2) TTTTTTTTTT (2)
| 18.3 | 0.0183 |
| P8 GC+SHH+1d culture | AGACATTGGT AGGTGGTTGT (2) CAGAGTGCTG (2) TTTTTTTTTT (2)
| 18.7 | 0.0187 |
| 3T3 fibroblasts | AGACATTGGT
| 10.5 | 0.0105 |
| E15 cortex | AGACATTGGT TTTTTTTTTT (2)
| 9.8 | 0.0098 |
| P1 cortex | AGACATTGGT TTTTTTTTTT (2)
| 9 | 0.009 |
| Hypothalamus | AGACATTTGT GAGTAGTGGC TTTTTTTTTT (2)
| 12.6 | 0.0126 |
| E12.5 retina | AGGTGGTTGT (2) CAGAGTGCTG (2) TTTTTTTTTT (2)
| 15 | 0.015 |
| E14.5 retina | AGGTGGTTGT (2) TTTTTTTTTT (2)
| 25.5 | 0.0255 |
| E16.5 retina | AGACATTGGT AGACATTTGT AGGTGGTTGT (2) GAGTAGTGGC TTTTTTTTTT (2)
| 16.2 | 0.0162 |
| E18.5 retina | GAGTAGTGGC TTTTTTTTTT (2)
| 12.7 | 0.0127 |
| P0.5 retina | AGACATTGGT AGGTGGTTGT (2) CAGAGTGCTG (2) TTTTTTTTTT (2)
| 23.6 | 0.0236 |
| P2.5 retina | AGACATTGGT CAGAGTGCTG (2) TTTTTTTTTT (2)
| 12.3 | 0.0123 |
| P4.5 retina | TTTTTTTTTT (2)
| 9.9 | 0.0099 |
| P6.5 retina | CAGAGTGCTG (2) GAGTAGTGGC TTTTTTTTTT (2)
| 11.7 | 0.0117 |
| P10.5 crx- retina | AGACATTGGT AGGTGGTTGT (2)
| 7.4 | 0.0074 |
| P10.5 crx+ retina | AGACATTGGT AGACATTTGT AGGTGGTTGT (2) CAGAGTGCTG (2) TTTTTTTTTT (2)
| 15.3 | 0.0153 |
| Adult retinal | AGGTGGTTGT (2) TTTTTTTTTT (2)
| 9.3 | 0.0093 |
| ONL | AGACATTGGT CAGAGTGCTG (2) TTTTTTTTTT (2)
| 7.6 | 0.0076 |