Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276251	Ina	internexin neuronal intermediate filament protein, alpha	19		226180
Gene Ontology	intermediate filament | intermediate filament cytoskeleton organization and biogenesis | neurogenesis | structural molecule activity
Human Homolog	INA[internexin neuronal intermediate filament protein, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACGCATCTGT CTGGCCATCC (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 32.6 0.0326 Cb medulloblastoma ACGCATCTGT AGCTTCGGAT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 50.7 0.0507 P8 GC+1d culture ACGCATCTGT CAGCTAATTT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCATA TAGTGGCGTA TCCTTGGCAG (2) TCCTTTCACA 75.2 0.0752 P8 GC+SHH+1d culture ACGCATCTGT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCATA TAGTGGCGTA TCCTTGGCAG (2) TCCTTTCACA 51.4 0.0514 3T3 fibroblasts CCAAATCTGC (3) GAACCCAACA (2) GGCACTGCGG (2) 56 0.056 E15 cortex ACGCATCTGT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 98.8 0.0988 P1 cortex ACGCATCTGT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 40.8 0.0408 Hypothalamus ACGCATCTGT AGGCAGACTG (2) GAACCCAACA (2) GGCACTGCGG (2) TCCTTTCACA 27.1 0.0271 E12.5 retina ACGCATCTGT GAACCCAACA (2) GGCACTGCGG (2) TCCTTTCACA 45 0.045 E14.5 retina ACGCATCTGT AGGCAGACTG (2) CAGCTAATTT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 72.9 0.0729 E16.5 retina ACGCATCTGT AGGCAGACTG (2) CTGGCCATCC (2) GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCATA TAGTGGCGTA TCCTTGGCAG (2) TCCTTTCACA 110.3 0.1103 E18.5 retina ACGCATCTGT AGCTTCGGAT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 45.5 0.0455 P0.5 retina ACGCATCTGT AGGCAGACTG (2) GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 72.7 0.0727 P2.5 retina ACGCATCTGT GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 35.3 0.0353 P4.5 retina ACGCATCTGT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 29.8 0.0298 P6.5 retina ACGCATCTGT AGGCAGACTG (2) GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTTCACA 45.1 0.0451 P10.5 crx- retina ACGCATCTGT CAGCTAATTT GGCACTGCGG (2) TCCTTTCACA 59.5 0.0595 P10.5 crx+ retina ACGCATCTGT GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA 59.5 0.0595 Adult retinal AGCTTCGGAT CAGCTAATTT CTGGCCATCC (2) GAACCCAACA (2) GGCACTGCGG (2) TAGTGGCGTA TCCTTGGCAG (2) TCCTTTCACA 29.9 0.0299 ONL CCAAATCTGC (3) GAACCCAACA (2) GGCACTGCGG (2) TCCTTTCACA 17.2 0.0172