| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT TGCCCCTCTA (4)
| 58.6 | 0.0586 |
| Cb medulloblastoma | CCTTTAATCC (3) GCAGCCTGGG
| 43.9 | 0.0439 |
| P8 GC+1d culture | CCAGCCTGGA (2) CCAGCCTGGG (2) CCTTTAATCC (3) TGATTTTCAT TGCCCCTCTA (4)
| 49 | 0.049 |
| P8 GC+SHH+1d culture | CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT
| 35.2 | 0.0352 |
| 3T3 fibroblasts | CCAGCCTGGG (2) CCTTTAATCC (3)
| 73.6 | 0.0736 |
| E15 cortex | CCAGCCTGGG (2) CCTTTAATCC (3)
| 59.3 | 0.0593 |
| P1 cortex | CCTTTAATCC (3)
| 154.5 | 0.1545 |
| Hypothalamus | CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT
| 37.9 | 0.0379 |
| E12.5 retina | CCAGCCTGGG (2) CCTTTAATCC (3) TGATTTTCAT
| 80.8 | 0.0808 |
| E14.5 retina | CCAGCCTGGG (2) CCTTTAATCC (3) TGATTTTCAT
| 127.6 | 0.1276 |
| E16.5 retina | CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT
| 74.2 | 0.0742 |
| E18.5 retina | CCTTTAATCC (3) GCAGCCTGGG
| 27.2 | 0.0272 |
| P0.5 retina | CCAGCCTGGG (2) CCTTTAATCC (3)
| 78.5 | 0.0785 |
| P2.5 retina | CCAGCCTGGA (2) CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT
| 82.8 | 0.0828 |
| P4.5 retina | CCAGCCTGGA (2) CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT
| 61.4 | 0.0614 |
| P6.5 retina | CCAGCCTGGG (2) CCTTTAATCC (3) TGATTTTCAT TGCCCCTCTA (4)
| 78.4 | 0.0784 |
| P10.5 crx- retina | CCAGCCTGGG (2) CCTTTAATCC (3)
| 66.9 | 0.0669 |
| P10.5 crx+ retina | CCAGCCTGGG (2) CCTTTAATCC (3) GCAGCCTGGG TGATTTTCAT
| 53.7 | 0.0537 |
| Adult retinal | CCAGCCTGGA (2) CCAGCCTGGG (2) CCTTTAATCC (3) TGATTTTCAT
| 140.8 | 0.1408 |
| ONL | CCAGCCTGGG (2) CCTTTAATCC (3)
| 86.2 | 0.0862 |