| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAAAAAA (2) GAGAAGACAC
| 52.2 | 0.0522 |
| Cb medulloblastoma | GAAAAAAAAA (2) GAGAAGAACC GAGAAGACAC GCCGAGCTGA (2)
| 205.7 | 0.2057 |
| P8 GC+1d culture | GAAAAAAAAA (2) GAGAAGACAC GAGGAGCAGG (2) GCCGAGCTGA (2)
| 53.6 | 0.0536 |
| P8 GC+SHH+1d culture | GAAAAAAAAA (2) GAGAAGAACC GAGAAGACAC GAGGAGCAGG (2) GCCGAGCTGA (2)
| 93.7 | 0.0937 |
| 3T3 fibroblasts | GAGAAGACAC
| 7 | 0.007 |
| E15 cortex | GAAAAAAAAA (2) GAGAAGAACC GAGAAGACAC
| 64.2 | 0.0642 |
| P1 cortex | GAAAAAAAAA (2)
| 45.5 | 0.0455 |
| Hypothalamus | GAAAAAAAAA (2) GAGAAGACAC
| 86.9 | 0.0869 |
| E12.5 retina | GAAAAAAAAA (2) GAGAAGACAC GAGGAGCAGG (2)
| 60.1 | 0.0601 |
| E14.5 retina | GAAAAAAAAA (2) GAGAAGACAC GAGGAGCAGG (2) GTTTCCATAG
| 51 | 0.051 |
| E16.5 retina | GAAAAAAAAA (2) GAGAAGAACC GAGAAGACAC GAGGAGCAGG (2)
| 39.8 | 0.0398 |
| E18.5 retina | GAAAAAAAAA (2) GAGAAGACAC GTTTCCATAG
| 76.4 | 0.0764 |
| P0.5 retina | GAAAAAAAAA (2) GAGAAGACAC GTTTCCATAG
| 45.2 | 0.0452 |
| P2.5 retina | GAAAAAAAAA (2) GAGAAGACAC
| 103.8 | 0.1038 |
| P4.5 retina | GAAAAAAAAA (2) GAGAAGACAC GCCGAGCTGA (2)
| 73.3 | 0.0733 |
| P6.5 retina | GAAAAAAAAA (2) GAGAAGACAC GAGGAGCAGG (2) GCCGAGCTGA (2) GTTTCCATAG
| 66.8 | 0.0668 |
| P10.5 crx- retina | GAAAAAAAAA (2) GAGAAGACAC
| 24.1 | 0.0241 |
| P10.5 crx+ retina | GAAAAAAAAA (2) GAGAAGAACC GAGAAGACAC GAGGAGCAGG (2) GCCGAGCTGA (2) TTGTGGTGAT
| 59.5 | 0.0595 |
| Adult retinal | GAAAAAAAAA (2) GAGAAGACAC GAGGAGCAGG (2) GCCGAGCTGA (2)
| 39 | 0.039 |
| ONL | GAAAAAAAAA (2) GAGAAGACAC GTTTCCATAG
| 34.5 | 0.0345 |