Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276294	Lgtn	ligatin	1	1 69.1 cM	16865
Gene Ontology	membrane | RNA binding | translation initiation factor activity | translational initiation
Human Homolog	LGTN[ligatin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAACCCAGG (5) 11.4 0.0114 Cb medulloblastoma GGAACCCAGG (5) 11.6 0.0116 P8 GC+1d culture GGAACCCAGG (5) TGACTGTAGT 6.8 0.0068 P8 GC+SHH+1d culture GGAACCCAGG (5) 4.7 0.0047 3T3 fibroblasts GGAACCCAGG (5) TTCTCCTGCT (2) 7 0.007 E15 cortex GGAACCCAGG (5) 9.9 0.0099 P1 cortex GGAACCCAGG (5) 4.5 0.0045 Hypothalamus GGAACCCAGG (5) TTCTCCTGCT (2) 9 0.009 E12.5 retina GGAACCCAGG (5) TGACTGTAGT 13.2 0.0132 E14.5 retina GGAACCCAGG (5) 12.8 0.0128 E16.5 retina GGAACCCAGG (5) 7.2 0.0072 E18.5 retina GGAACCCAGG (5) 14.6 0.0146 P0.5 retina GGAACCCAGG (5) TGACTGTAGT 7.9 0.0079 P2.5 retina GGAACCCAGG (5) TTCTCCTGCT (2) 5.3 0.0053 P4.5 retina GGAACCCAGG (5) TGACTGTAGT 9.9 0.0099 P6.5 retina GGAACCCAGG (5) 8.3 0.0083 P10.5 crx- retina GGAACCCAGG (5) TGACTGTAGT 14.8 0.0148 P10.5 crx+ retina GGAACCCAGG (5) TGACTGTAGT 19.2 0.0192 Adult retinal GGAACCCAGG (5) TGACTGTAGT 5.6 0.0056 ONL GGAACCCAGG (5) 1.9 0.0019