| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAGGAAAAA (2) GGCCTGCCCC
| 3.2 | 0.0032 |
| Cb medulloblastoma | GAAGGAAAAA (2) GCCCTTCTGG (2) GGCACGGGGC (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | GCCACTTTGA GCCCTTCTGG (2) GGCACGGGGC (3) GGCCTTGCCA GGGACTGGGG
| 9 | 0.009 |
| P8 GC+SHH+1d culture | GAAGGAAAAA (2) GCCACTTTGA GGCACGGGGC (3) GGCCTTGCCA TTTTGTTTTG (2)
| 10.5 | 0.0105 |
| 3T3 fibroblasts | GCCACTTTGA
| 3.5 | 0.0035 |
| E15 cortex | GAAGGAAAAA (2)
| 9.9 | 0.0099 |
| P1 cortex | GAAGGAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | GCCACTTTGA
| 1.8 | 0.0018 |
| E12.5 retina | AAAGAACTTT (2) GAAGGAAAAA (2) GGCCTGCCCC
| 9.4 | 0.0094 |
| E14.5 retina | GAAGGAAAAA (2) GCCACTTTGA GGCCTGCCCC
| 9 | 0.009 |
| E16.5 retina | GAAGGAAAAA (2) GGCCTGCCCC GGCCTTGCCA
| 5.4 | 0.0054 |
| E18.5 retina | GAAGGAAAAA (2) GGCACGGGGC (3) GGCACTGGGG (2) GGCCTGCCCC
| 25.4 | 0.0254 |
| P0.5 retina | GAAGGAAAAA (2)
| 3.9 | 0.0039 |
| P2.5 retina | AAAGAACTTT (2) GAAGGAAAAA (2) GGCCTGCCCC
| 8.8 | 0.0088 |
| P4.5 retina | GAAGGAAAAA (2) GGCCTGCCCC
| 7.9 | 0.0079 |
| P6.5 retina | GCCCTTCTGG (2) GGCACGGGGC (3) GGCCTGCCCC
| 10 | 0.01 |
| P10.5 crx- retina | GCCCTTCTGG (2) GGCACGGGGC (3) TTTTGTTTTG (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | GAAGGAAAAA (2) GCCCTTCTGG (2) GGCACGGGGC (3) GGCACTGGGG (2) GGCCTGCCCC TTTTGTTTTG (2)
| 11.4 | 0.0114 |
| Adult retinal | GCCCTTCTGG (2) GGCACGGGGC (3) GGGACTGGGG TTTTGTTTTG (2)
| 14.9 | 0.0149 |
| ONL | GAAGGAAAAA (2) GCCCTTCTGG (2) GGCACTGGGG (2) GGGACTGGGG
| 11.4 | 0.0114 |