Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276499	Ii	Ia-associated invariant chain	18	18 32.0 cM	16149
Gene Ontology	antigen presentation | antigen presentation | antigen presentation, exogenous antigen via MHC class II | antigen processing | antigen processing | antigen processing, exogenous antigen via MHC class II | chaperone activity | chaperone activity | defense response | endoplasmic reticulum | external side of plasma membrane | Golgi apparatus | humoral defense mechanism (sensu Vertebrata) | immune response | integral to membrane | integral to plasma membrane | intracellular protein transport | intracellular protein transport | lysosome | multivesicular body | negative regulation of T-cell differentiation | negative thymic T-cell selection | plasma membrane | plasma membrane | positive regulation of T-cell differentiation | positive thymic T-cell selection | protein binding | protein complex assembly | protein folding
Human Homolog	CD74[CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 12 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CCCCACCCCC (2) 2.3 0.0023 P8 GC+1d culture GTTCAAGTGA 3.4 0.0034 P8 GC+SHH+1d culture CCCCACCCCC (2) GTTCAAGTGA 3.5 0.0035 E15 cortex CCCCACCCCC (2) 9.9 0.0099 E14.5 retina CCCCACCCCC (2) GTTCAAGTGA 3.6 0.0036 E16.5 retina CCCCACCCCC (2) 1.8 0.0018 P0.5 retina GTTCAAGTGA 2 0.002 P2.5 retina CCCCACCCCC (2) 1.8 0.0018 P10.5 crx- retina CCCCACCCCC (2) 1.9 0.0019 Adult retinal CCCCACCCCC (2) 1.9 0.0019