Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276618	Atp6v1c1	ATPase, H+ transporting, V1 subunit C, isoform 1	15		66335
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6V1C1[ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C, isoform 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCCCAAGAA TGTTGGGAAA 6.5 0.0065 Cb medulloblastoma GTATGCATAA GTGATATTTA TGCCCAAGAA TGTTGGGAAA 29.9 0.0299 P8 GC+1d culture GATATCCCTG (2) GTATGCATAA GTGATATTTA TGCCCAAGAA TGGTCCATAT 7.9 0.0079 P8 GC+SHH+1d culture GTGATATTTA TGCCCAAGAA TGGTCCATAT TGTTGGGAAA 7 0.007 E15 cortex GTATGCATAA TGTTGGGAAA 9.8 0.0098 P1 cortex GTATGCATAA 4.5 0.0045 Hypothalamus GGGGGGGGGA (2) GTATGCATAA GTGATATTTA TGCCCAAGAA 25.4 0.0254 E12.5 retina ACTTGTTCTC GGGGGGGGGA (2) GTGATATTTA TGTTGGGAAA 13.3 0.0133 E14.5 retina GTGATATTTA TGCCCAAGAA TGTTGGGAAA 20 0.02 E16.5 retina TGTTGGGAAA 3.6 0.0036 E18.5 retina GGGGGGGGGA (2) GTGATATTTA TGGTCCATAT TGTTGGGAAA 7.2 0.0072 P0.5 retina ACTTGTTCTC GATATCCCTG (2) GTATGCATAA TGCCCAAGAA TGGTCCATAT TGTTGGGAAA 13.9 0.0139 P2.5 retina GTGATATTTA TGGTCCATAT TGTTGGGAAA 7.1 0.0071 P4.5 retina GATATCCCTG (2) GGGGGGGGGA (2) GTGATATTTA TGGTCCATAT TGTTGGGAAA 15.9 0.0159 P6.5 retina TGCCCAAGAA TGGTCCATAT TGTTGGGAAA 5.1 0.0051 P10.5 crx- retina ACTTGTTCTC GGGGGGGGGA (2) GTGATATTTA TGGTCCATAT TGTTGGGAAA 13.2 0.0132 P10.5 crx+ retina TGTTGGGAAA 7.7 0.0077 Adult retinal GTATGCATAA GTGATATTTA TGCCCAAGAA 9.3 0.0093 ONL GTGATATTTA TGGTCCATAT 3.8 0.0038