Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27711
1700037H04Rik
RIKEN cDNA 1700037H04 gene
2
67326
Human Homolog
C20orf27[chromosome 20 open reading frame 27]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 23 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCAGCCA
TGCCTGAGTC
(
2
)
3.2
0.0032
Cb medulloblastoma
CCCCCCACCC (
3
)
4.6
0.0046
P8 GC+1d culture
GCTGCAGCCA
TGCCTGAGTC
(
2
)
2.2
0.0022
P8 GC+SHH+1d culture
GCTGCAGCCA
TGCCTGAGTC
(
2
)
3.5
0.0035
3T3 fibroblasts
TGCCTGAGTC
(
2
)
3.5
0.0035
E15 cortex
GTTACTCAGG
(
2
)
TGCCTGAGTC
(
2
)
9.8
0.0098
P1 cortex
TGCCTGAGTC
(
2
)
4.5
0.0045
Hypothalamus
TGCCTGAGTC
(
2
)
3.6
0.0036
E16.5 retina
CCCCCCACCC (
3
)
TGCCTGAGTC
(
2
)
3.6
0.0036
P0.5 retina
CCCCCCACCC (
3
)
GCTGCAGCCA
TGCCTGAGTC
(
2
)
6
0.006
P2.5 retina
CCCCCCACCC (
3
)
1.8
0.0018
P4.5 retina
GCTGCAGCCA
2
0.002
P10.5 crx- retina
TGCCTGAGTC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCTGCAGCCA
1.9
0.0019
Adult retinal
TGCCTGAGTC
(
2
)
1.9
0.0019
ONL
GTTACTCAGG
(
2
)
3.8
0.0038
