Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277403	Stat5a	signal transducer and activator of transcription 5A	11	11 60.5 cM	20850
Gene Ontology	copper ion binding | cytoplasm | DNA binding | electron transport | electron transporter activity | intracellular signaling cascade | lactation | nucleus | protein binding | regulation of cell adhesion | regulation of epithelial cell differentiation | regulation of transcription, DNA-dependent | signal transducer activity | signal transduction | transcription factor activity
Human Homolog	STAT5A[signal transducer and activator of transcription 5A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 17.8 0.0178 Cb medulloblastoma AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) 41.6 0.0416 P8 GC+1d culture AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 9.1 0.0091 P8 GC+SHH+1d culture AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 12.9 0.0129 3T3 fibroblasts AGGGCCATCC (2) CCTGTAATCC (2) 21 0.021 E15 cortex AGGGCCATCC (2) CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 19.6 0.0196 P1 cortex CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 27.2 0.0272 Hypothalamus AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 39.8 0.0398 E12.5 retina CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 75.1 0.0751 E14.5 retina AGGGCCATCC (2) CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 83.8 0.0838 E16.5 retina CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 139.5 0.1395 E18.5 retina CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 169.1 0.1691 P0.5 retina AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 141.3 0.1413 P2.5 retina AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 186.6 0.1866 P4.5 retina AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 140.6 0.1406 P6.5 retina AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 48.4 0.0484 P10.5 crx- retina AGGGCCATCC (2) CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 35.3 0.0353 P10.5 crx+ retina AGGGCCATCC (2) CCTGTAATCC (2) GTGGGTTCAA (2) TCTGTGTCCT (3) TGGGAGAACA 19.1 0.0191 Adult retinal AGGGCCATCC (2) CCTGTAATCC (2) TCTGTGTCCT (3) TGGGAGAACA 11.2 0.0112 ONL CCTGTAATCC (2) 3.8 0.0038