| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA TTAGACAAAA (2)
| 27.8 | 0.0278 |
| Cb medulloblastoma | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAGAACTTTT (2) GGGGAAATGG TTAGACAAAA (2)
| 41.5 | 0.0415 |
| P8 GC+1d culture | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAAATTCTAT GAATGATTTC (3) TTAGACAAAA (2) TTGGATCTGA
| 32 | 0.032 |
| P8 GC+SHH+1d culture | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAGAACTTTT (2) TATAACTTTG (3) TTAGACAAAA (2)
| 19.9 | 0.0199 |
| 3T3 fibroblasts | AAATTCTGCA
| 3.5 | 0.0035 |
| E15 cortex | ACTGGCTGAT (2)
| 9.9 | 0.0099 |
| P1 cortex | AAAAATAAAA (3) GCTTTTAAAA (3) GGGGAAATGG
| 18.1 | 0.0181 |
| Hypothalamus | AAAAAATAAA (3) AAAAATAAAA (3) ACTGGCTGAT (2)
| 27.2 | 0.0272 |
| E12.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAAATTCTAT
| 20.7 | 0.0207 |
| E14.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAAATTCTAT TTAGACAAAA (2)
| 29.1 | 0.0291 |
| E16.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GCTTTTAAAA (3) TTAGACAAAA (2)
| 25.4 | 0.0254 |
| E18.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAATGATTTC (3) GAGAACTTTT (2) GCTTTTAAAA (3) TTAGACAAAA (2)
| 41.9 | 0.0419 |
| P0.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) TTAGACAAAA (2)
| 7.9 | 0.0079 |
| P2.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) GAAATTCTAT GCTTTTAAAA (3) GGGGAAATGG TATAACTTTG (3) TTAGACAAAA (2)
| 23.1 | 0.0231 |
| P4.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) GAATGATTTC (3) GAGAACTTTT (2) GTTATGATAG (2) TTAGACAAAA (2)
| 37.7 | 0.0377 |
| P6.5 retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAATGATTTC (3) GAGAACTTTT (2) TTGGATCTGA
| 31.7 | 0.0317 |
| P10.5 crx- retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GGGGAAATGG GTTATGATAG (2) TTAGACAAAA (2)
| 22.4 | 0.0224 |
| P10.5 crx+ retina | AAAAAATAAA (3) AAAAATAAAA (3) AAATTCTGCA GAGAACTTTT (2) GCTTTTAAAA (3)
| 15.3 | 0.0153 |
| Adult retinal | AAAAATAAAA (3) GAATGATTTC (3) TATAACTTTG (3)
| 5.7 | 0.0057 |
| ONL | AAAAAATAAA (3) AAATTCTGCA TTAGACAAAA (2)
| 26.8 | 0.0268 |