| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 18 | 0.018 |
| Cb medulloblastoma | TAACTTAAGC (2) TGCATTGCTG TTCCCACTTT
| 27.7 | 0.0277 |
| P8 GC+1d culture | AAAACTGGGG AACTGCGGAA GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG TTCCCACTTT
| 24 | 0.024 |
| P8 GC+SHH+1d culture | AACTGCGGAA CTAACACTGA GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG TTCCCACTTT
| 28 | 0.028 |
| 3T3 fibroblasts | AACTGCGGAA
| 10.5 | 0.0105 |
| E15 cortex | AACTGCGGAA TAACTTAAGC (2)
| 9.8 | 0.0098 |
| P1 cortex | AAAACTGGGG AACTGCGGAA TAACTTAAGC (2) TGCATTGCTG
| 40.8 | 0.0408 |
| Hypothalamus | AAAACTGGGG CTAACACTGA GACTTGGTGT GTGACAAGGA GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 45.3 | 0.0453 |
| E12.5 retina | GACTTGGTGT GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 15.1 | 0.0151 |
| E14.5 retina | GTGACAAGGA TAACTTAAGC (2) TGCATTGCTG
| 9 | 0.009 |
| E16.5 retina | GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 18 | 0.018 |
| E18.5 retina | GTGACAAGGA TAACTTAAGC (2) TGCATTGCTG
| 10.9 | 0.0109 |
| P0.5 retina | AAAACTGGGG GACTTGGTGT GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 25.5 | 0.0255 |
| P2.5 retina | AACTGCGGAA GTTTTTAAAT TGCATTGCTG
| 31.7 | 0.0317 |
| P4.5 retina | TAACTTAAGC (2) TGCATTGCTG TTCCCACTTT
| 23.8 | 0.0238 |
| P6.5 retina | AAAACTGGGG GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG TTCCCACTTT
| 33.3 | 0.0333 |
| P10.5 crx- retina | CTAACACTGA GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 18.6 | 0.0186 |
| P10.5 crx+ retina | AAAACTGGGG CTAACACTGA TAACTTAAGC (2) TGCATTGCTG TTCCCACTTT
| 11.4 | 0.0114 |
| Adult retinal | AAAACTGGGG AACTGCGGAA AACTGCGGGG GTTTTTAAAT TAACTTAAGC (2) TGCATTGCTG
| 31.5 | 0.0315 |
| ONL | TAACTTAAGC (2) TGCATTGCTG
| 15.3 | 0.0153 |