Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277812	Vil2	villin 2	17		22350
Gene Ontology	apical part of cell | apical plasma membrane | basal body | cellular morphogenesis | cytoplasm | cytoskeletal protein binding | cytoskeleton | establishment and/or maintenance of apical/basal cell polarity | membrane | protein binding | structural molecule activity
Human Homolog	VIL2[villin 2 (ezrin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAATTTGGT (2) CTTATCTGTT CTTTATCTTG GAACACACAG TAACCGAGAC 14.6 0.0146 Cb medulloblastoma AGAATTTGGT (2) CCTTTGACTT (2) CTTATCTGTT GAGAGCTTTT (2) GGCAGGGAGG 16.1 0.0161 P8 GC+1d culture AGAATTTGGT (2) CCTTTGACTT (2) CTTATCTGTT CTTTATCTTG GAACACACAG GAGAGCTTTT (2) GCCGCCCTGC GTTTAGACTC TAACCGAGAC 15.8 0.0158 P8 GC+SHH+1d culture CTTATCTGTT CTTTATCTTG GAACACACAG GAGAGCTTTT (2) GCCGCCCTGC GTTTAGACTC TAACCGAGAC 16.4 0.0164 3T3 fibroblasts CTTATCTGTT GAACACACAG GCCGCCCTGC 21 0.021 E15 cortex TAACCGAGAC 4.9 0.0049 P1 cortex AGAATTTGGT (2) GAACACACAG 18.2 0.0182 Hypothalamus ACCAAGTTGA CTTATCTGTT CTTTATCTTG GAACACACAG GAGAGCTTTT (2) GGCAGGGAGG GTTTAGACTC 14.4 0.0144 E12.5 retina AGAATTTGGT (2) CTTATCTGTT CTTTATCTTG GAACACACAG GAGAGCTTTT (2) GGCAGGGAGG TAACCGAGAC 18.9 0.0189 E14.5 retina AGAATTTGGT (2) CTTTATCTTG 3.6 0.0036 E16.5 retina AGAATTTGGT (2) CTTTATCTTG 5.4 0.0054 E18.5 retina CTTTATCTTG GGCAGGGAGG TAACCGAGAC 5.4 0.0054 P0.5 retina CTTATCTGTT CTTTATCTTG GAACACACAG GTTTAGACTC 13.8 0.0138 P2.5 retina CTTTATCTTG GAACACACAG GAGAGCTTTT (2) GGCAGGGAGG 14.2 0.0142 P4.5 retina AGAATTTGGT (2) CTTATCTGTT CTTTATCTTG GGCAGGGAGG TAACCGAGAC 15.9 0.0159 P6.5 retina CTTTATCTTG GAACACACAG 5 0.005 P10.5 crx- retina AGAATTTGGT (2) CTTTATCTTG GAGAGCTTTT (2) 11.2 0.0112 P10.5 crx+ retina CTTTATCTTG GAACACACAG GACCACACAA 7.6 0.0076 Adult retinal ACCAAGTTGA AGAATTTGGT (2) CTTTATCTTG GAGAGCTTTT (2) GGCAGGGAGG 11.3 0.0113 ONL ACCAAGTTGA CCTTTGACTT (2) GACCACACAA 9.5 0.0095