| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGCGGCTGTG (3) GGCGGCTTTG
| 9.8 | 0.0098 |
| Cb medulloblastoma | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 18.4 | 0.0184 |
| P8 GC+1d culture | GGCGGCTTTG
| 4.6 | 0.0046 |
| P8 GC+SHH+1d culture | GGCGGCTGTG (3) GGCGGCTTTG
| 10.5 | 0.0105 |
| 3T3 fibroblasts | GGCGGCTGTG (3) GGCGGCTTTG
| 35 | 0.035 |
| E15 cortex | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 19.7 | 0.0197 |
| P1 cortex | GGCCTCTAAA (3)
| 4.5 | 0.0045 |
| Hypothalamus | GGCCTCTAAA (3) GGCGGCTGTG (3)
| 3.6 | 0.0036 |
| E12.5 retina | GGCGGCTTTG
| 9.4 | 0.0094 |
| E14.5 retina | GGCGGCTTTG
| 1.8 | 0.0018 |
| E16.5 retina | GGCGGCTTTG
| 3.6 | 0.0036 |
| E18.5 retina | GGCCTCTAAA (3) GGCGGCTTTG
| 5.4 | 0.0054 |
| P0.5 retina | GGCGGCTGTG (3) GGCGGCTTTG
| 15.7 | 0.0157 |
| P2.5 retina | GGCGGCTGTG (3) GGCGGCTTTG
| 5.3 | 0.0053 |
| P4.5 retina | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 13.9 | 0.0139 |
| P6.5 retina | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 13.4 | 0.0134 |
| P10.5 crx- retina | GGCGGCTGTG (3) GGCGGCTTTG
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 17.2 | 0.0172 |
| Adult retinal | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 24.1 | 0.0241 |
| ONL | GGCCTCTAAA (3) GGCGGCTGTG (3) GGCGGCTTTG
| 7.6 | 0.0076 |