Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277916	Ptpn1	protein tyrosine phosphatase, non-receptor type 1	2		19246
Gene Ontology	hydrolase activity | integral to membrane | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity
Human Homolog	PTPN1[protein tyrosine phosphatase, non-receptor type 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCACCATTG GAGAAAGGCT (2) 21.2 0.0212 Cb medulloblastoma CGCACCATTG GGTGGCTTTT (2) 16.2 0.0162 P8 GC+1d culture ACTCTTCTGG (2) CGCACCATTG CTCCAGGCTG 27.3 0.0273 P8 GC+SHH+1d culture ACTCTTCTGG (2) CGCACCATTG GCCACGCTCC 22.3 0.0223 3T3 fibroblasts CGCACCATTG GAGATGGAGA GCCACGCTCC 63.1 0.0631 E15 cortex ACTCTTCTGG (2) CGCACCATTG CTCCAGGCTG GCCACGCTCC TTGTTTTTGG (3) 49.3 0.0493 P1 cortex GAGAAAGGCT (2) GCCACGCTCC TTGTTTTTGG (3) 18.1 0.0181 Hypothalamus ATTTCTATGG (4) CGCACCATTG CTCCAGGCTG 12.7 0.0127 E12.5 retina CGCACCATTG TTGTTTTTGG (3) 3.8 0.0038 E14.5 retina CGCACCATTG GAGATGGAGA 5.4 0.0054 E16.5 retina ATTTCTATGG (4) CGCACCATTG CTCCAGGCTG GAGAAAGGCT (2) GAGATGGAGA GGTGGCTTTT (2) 28.9 0.0289 E18.5 retina CGCACCATTG GAGATGGAGA GCCACGCTCC 20 0.02 P0.5 retina ACTCTTCTGG (2) CGCACCATTG TTGTTTTTGG (3) 29.4 0.0294 P2.5 retina CGCACCATTG GGTGGCTTTT (2) TTGTTTTTGG (3) 14.2 0.0142 P4.5 retina CGCACCATTG GCCACGCTCC GGTGGCTTTT (2) 9.9 0.0099 P6.5 retina CGCACCATTG 11.7 0.0117 P10.5 crx- retina ATTTCTATGG (4) CGCACCATTG TTGTTTTTGG (3) 39 0.039 P10.5 crx+ retina CGCACCATTG GCCACGCTCC 19.2 0.0192 Adult retinal ACTCTTCTGG (2) CGCACCATTG 18.6 0.0186 ONL ACTCTTCTGG (2) CGCACCATTG 3.8 0.0038