| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAGAA AAAACGAAAA (3) AAAACGAGAA AAAAGGAAAG
| 6.4 | 0.0064 |
| Cb medulloblastoma | AAAAAAAGAA AAAACGAGAA AAGAGGAGAA (2) GTAATGGCCT
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAAAAAAGAA AAAAAGAGAA AAAACGAAAA (3) AAAACGAGAA GCAATGGCCT GTAATGGCCT TATTTCAACT
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | AAAACGAAAA (3) AAGAGGAGAA (2) GCAATGGCCT GTAATGGCCT TATTTCAACT
| 8.2 | 0.0082 |
| P1 cortex | AAAACAATAA
| 4.5 | 0.0045 |
| Hypothalamus | AAAAAAAGAA AAAAAGAGAA AAAACGAGAA GCAATGGCCT
| 7.2 | 0.0072 |
| E12.5 retina | AAAAAAAGAA AAAAAGAGAA AAAACAATAA AAAACGAAAA (3)
| 11.4 | 0.0114 |
| E14.5 retina | AAAACGAAAA (3) AAAAGGAAAG GCAATGGCCT
| 5.4 | 0.0054 |
| E16.5 retina | AAAACAATAA AAAAGGAAAG GCAATGGCCT
| 10.8 | 0.0108 |
| E18.5 retina | AAAACGAAAA (3) AAAACGAGAA GCAATGGCCT
| 10.9 | 0.0109 |
| P0.5 retina | GCAATGGCCT TATTTCAACT
| 4 | 0.004 |
| P2.5 retina | AAAAAAAGAA TATTTCAACT
| 8.8 | 0.0088 |
| P6.5 retina | AAAAAGAGAA AAAACGAAAA (3)
| 5 | 0.005 |
| P10.5 crx- retina | AAAAAGAGAA AAAACAATAA AAAAGGAAAG GCAATGGCCT
| 9.4 | 0.0094 |
| P10.5 crx+ retina | AAAAGGAAAG GCAATGGCCT
| 3.8 | 0.0038 |
| Adult retinal | AAAAAAAGAA GCAATGGCCT
| 7.4 | 0.0074 |
| ONL | AAAAAAAGAA
| 1.9 | 0.0019 |