Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278578	Suv420h1	suppressor of variegation 4-20 homolog 1 (Drosophila)	19	19 A	225888
Gene Ontology	condensed nuclear chromosome, pericentric region | histone lysine N-methyltransferase activity (H4-K20 specific) | histone methylation
Human Homolog	SUV420H1[suppressor of variegation 4-20 homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGTAAATG CACTTGCAGT CCTTTAATCC (3) GTGGTGAATG TACAAAATAT (3) 66.9 0.0669 Cb medulloblastoma CACTTGCAGT CCTTTAATCC (3) TACAAAATAT (3) TGGTCGCTGG 48.5 0.0485 P8 GC+1d culture CACTTGCAGT CCTTTAATCC (3) TTCTTGGAGT (4) 36.5 0.0365 P8 GC+SHH+1d culture AGTCACAGCT CACTTGCAGT CCTTTAATCC (3) TTGTCACCTA (4) 31.7 0.0317 3T3 fibroblasts CCTTTAATCC (3) 70.1 0.0701 E15 cortex CACTTGCAGT CCTTTAATCC (3) 59.3 0.0593 P1 cortex CCTTTAATCC (3) 154.5 0.1545 Hypothalamus CACTTGCAGT CCTTTAATCC (3) GTGGTGAATG TTCTTGGAGT (4) TTGTCACCTA (4) 27.1 0.0271 E12.5 retina CACTTGCAGT CCTTTAATCC (3) TACAAAATAT (3) 78.9 0.0789 E14.5 retina AGGAGCTGAG (3) CACTTGCAGT CCTTTAATCC (3) TGGTCGCTGG TTCTTGGAGT (4) 142.1 0.1421 E16.5 retina ATGGTAAATG CACTTGCAGT CCTTTAATCC (3) GTGGTGAATG TGGTCGCTGG 94.1 0.0941 E18.5 retina AGGAGCTGAG (3) CACTTGCAGT CCTTTAATCC (3) GTGGTGAATG 32.6 0.0326 P0.5 retina CACTTGCAGT CCTTTAATCC (3) GGAAGGTCGG GTGGTGAATG TGGTCGCTGG TTGTCACCTA (4) 82.6 0.0826 P2.5 retina AGTCACAGCT CACTTGCAGT CCTTTAATCC (3) 81 0.081 P4.5 retina CACTTGCAGT CCTTTAATCC (3) TGGTCGCTGG 55.5 0.0555 P6.5 retina ATGGTAAATG CACTTGCAGT CCTTTAATCC (3) TGGTCGCTGG 98.3 0.0983 P10.5 crx- retina AGTCACAGCT CACTTGCAGT CCTTTAATCC (3) TACAAAATAT (3) 81.9 0.0819 P10.5 crx+ retina ATGGTAAATG CACTTGCAGT CCTTTAATCC (3) TGGTCGCTGG 49.9 0.0499 Adult retinal CACTTGCAGT CCTTTAATCC (3) GGAAGGTCGG TTGTCACCTA (4) 139 0.139 ONL AGGAGCTGAG (3) CACTTGCAGT CCTTTAATCC (3) GGAAGGTCGG TGGTCGCTGG 91.9 0.0919