| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGAACTTCAA AGACAAAAAA (5) CAGCAGACTC (2) TGTCCAGGGC
| 9.8 | 0.0098 |
| Cb medulloblastoma | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) CTGGTGTTTG (2)
| 34.7 | 0.0347 |
| P8 GC+1d culture | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) CAGCAGACTC (2) TGGAGACAGG TGTCCAGGGC
| 21.6 | 0.0216 |
| P8 GC+SHH+1d culture | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) CAGCAGACTC (2) CTGGTGTTTG (2) TGGACCCTGT TGTCCAGGGC
| 22.2 | 0.0222 |
| 3T3 fibroblasts | TGTCCAGGGC
| 3.5 | 0.0035 |
| E15 cortex | AGAACTTCAA TGGAGACAGG
| 9.8 | 0.0098 |
| P1 cortex | AGACAAAAAA (5) TGTCCAGGGC
| 22.7 | 0.0227 |
| Hypothalamus | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) GAACTCACTT (2) TGGAGACAGG TGTCCAGGGC
| 32.5 | 0.0325 |
| E12.5 retina | ACTGGATAGT AGACAAAAAA (5) CAGCAGACTC (2) TGGACCCTGT TGTCCAGGGC
| 20.8 | 0.0208 |
| E14.5 retina | ACTGGATAGT AGACAAAAAA (5) TGGACCCTGT
| 10.9 | 0.0109 |
| E16.5 retina | AGACAAAAAA (5) TGGACCCTGT
| 9 | 0.009 |
| E18.5 retina | ACTGGATAGT AGACAAAAAA (5) GAACTCACTT (2) GGAGCAGCAA TGGACCCTGT TGTCCAGGGC
| 19.9 | 0.0199 |
| P0.5 retina | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) TGGACCCTGT TGTCCAGGGC
| 11.9 | 0.0119 |
| P2.5 retina | ACTGGATAGT AGACAAAAAA (5) CAGCAGACTC (2) TGTCCAGGGC
| 14.1 | 0.0141 |
| P4.5 retina | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) TGGACCCTGT
| 19.8 | 0.0198 |
| P6.5 retina | ACTGGATAGT AGAACTTCAA AGACAAAAAA (5) GAACTCACTT (2) TGTCCAGGGC
| 30.1 | 0.0301 |
| P10.5 crx- retina | ACTGGATAGT AGACAAAAAA (5) GGAGCAGCAA
| 18.6 | 0.0186 |
| P10.5 crx+ retina | ACTGGATAGT AGACAAAAAA (5) GAACTCACTT (2) TGTCCAGGGC
| 21.1 | 0.0211 |
| Adult retinal | ACTGGATAGT AGACAAAAAA (5) CTGGTGTTTG (2) GAACTCACTT (2) TGTCCAGGGC
| 48.3 | 0.0483 |
| ONL | AGAACTTCAA AGACAAAAAA (5) TGTCCAGGGC
| 63.2 | 0.0632 |