Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279361	Vcl	vinculin	14	14 2.5 cM	22330
Gene Ontology	actin binding | adherens junction | cell adhesion | costamere | cytoskeleton | focal adhesion | intercellular junction | lamellipodium biogenesis | metabolism | oxidoreductase activity | protein binding | regulation of cell migration | structural molecule activity
Human Homolog	VCL[vinculin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCTGCTGA (2) TGGTTGCTGG TTTGTTTGTT (2) 112.5 0.1125 Cb medulloblastoma TCCACCAGAT (2) TGGTTGCTGG TTTGTTTGTT (2) 117.9 0.1179 P8 GC+1d culture TGGTTGCTGG TTTGTTTGTT (2) 66.2 0.0662 P8 GC+SHH+1d culture AACCACATAG TGGTTGCTGG TTTGTTTGTT (2) 100.7 0.1007 3T3 fibroblasts TGGTTGCTGG 220.8 0.2208 E15 cortex CTTTGTCACT TCCACCAGAT (2) TGGTTGCTGG 286.9 0.2869 P1 cortex TGGTTGCTGG 86.4 0.0864 Hypothalamus GCTCTGCTGA (2) TGAAAGATGC TGGTTGCTGG TTTGTTTGTT (2) 356.8 0.3568 E12.5 retina AACCACATAG TGAAAGATGC TGGTTGCTGG TTTGTTTGTT (2) 167.2 0.1672 E14.5 retina AACCACATAG TGAAAGATGC TGGTTGCTGG TTTGTTTGTT (2) 943.7 0.9437 E16.5 retina AACCACATAG TGAAAGATGC TGGTTGCTGG TTTGTTTGTT (2) 784.1 0.7841 E18.5 retina TGGTTGCTGG TTTGTTTGTT (2) 258.3 0.2583 P0.5 retina AACCACATAG TCCACCAGAT (2) TGGTTGCTGG 194.4 0.1944 P2.5 retina TCCACCAGAT (2) TGGTTGCTGG TTTGTTTGTT (2) 174.2 0.1742 P4.5 retina AACCACATAG TGGTTGCTGG TTTGTTTGTT (2) 156.6 0.1566 P6.5 retina AACCACATAG CTTTGTCACT TGGTTGCTGG TTTGTTTGTT (2) 168.4 0.1684 P10.5 crx- retina TGGTTGCTGG TTTGTTTGTT (2) 286.1 0.2861 P10.5 crx+ retina AACCACATAG CTTTGTCACT TGGTTGCTGG TTTGTTTGTT (2) 107.6 0.1076 Adult retinal AACCACATAG TCCACCAGAT (2) TGGTTGCTGG TTTGTTTGTT (2) 231.5 0.2315 ONL TGGTTGCTGG TTTGTTTGTT (2) 408 0.408