Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27949
Sh3md2
SH3 multiple domains 2
8
59009
Mm.27949
1700001D01Rik
RIKEN cDNA 1700001D01 gene
8
69279
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGAGCTGGG
3.3
0.0033
Cb medulloblastoma
TGGAGCTGGG
2.3
0.0023
P8 GC+1d culture
TAATATATAA (
5
)
TGGAGCTGGG
5.7
0.0057
P8 GC+SHH+1d culture
TAATATATAA (
5
)
1.2
0.0012
E12.5 retina
CCTTTTATGG
(
2
)
TGGAGCTGGG
3.8
0.0038
E16.5 retina
CCTTTTATGG
(
2
)
5.4
0.0054
E18.5 retina
CCTTTTATGG
(
2
)
TGGAGCTGGG
3.6
0.0036
P0.5 retina
CCTTTTATGG
(
2
)
TAATATATAA (
5
)
4
0.004
P2.5 retina
TAATATATAA (
5
)
1.8
0.0018
P4.5 retina
CCTTTTATGG
(
2
)
TAATATATAA (
5
)
4
0.004
P6.5 retina
CCTTTTATGG
(
2
)
TAATATATAA (
5
)
6.7
0.0067
P10.5 crx- retina
CCTTTTATGG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCTTTTATGG
(
2
)
1.9
0.0019
ONL
TAATATATAA (
5
)
1.9
0.0019
