| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGTTATTT (3) CTGGGCTTGA (2) GGCCACCTGG (2) GGGTTCAGGG (2)
| 8.1 | 0.0081 |
| Cb medulloblastoma | CTGGGCTTGA (2) GGGGGGGGGG
| 9.2 | 0.0092 |
| P8 GC+1d culture | AAAGTTATTT (3) AGCCGTCTGT (2) CTGGGCTTGA (2) GGGGGGGGGG GGGTTCAGGG (2) TTTCCACCTC (2)
| 14.9 | 0.0149 |
| P8 GC+SHH+1d culture | AAAGTTATTT (3) AGCCGTCTGT (2) CTGGGCTTGA (2) GGGGGGGGGG TTTCCACCTC (2)
| 21.1 | 0.0211 |
| 3T3 fibroblasts | GGGGGGGGGG TTTCCACCTC (2)
| 7 | 0.007 |
| E15 cortex | CTGGGCTTGA (2) GGGGGGGGGG
| 14.8 | 0.0148 |
| P1 cortex | CTGGGCTTGA (2)
| 9.1 | 0.0091 |
| Hypothalamus | GGGGGGGGGG
| 1.8 | 0.0018 |
| E12.5 retina | AAAGTTATTT (3) CTGGGCTTGA (2) TTTCCACCTC (2)
| 13.1 | 0.0131 |
| E14.5 retina | AAAGTTATTT (3) CTGGGCTTGA (2) GGGTTCAGGG (2)
| 9.1 | 0.0091 |
| E16.5 retina | TTTCCACCTC (2)
| 3.6 | 0.0036 |
| E18.5 retina | AAAGTTATTT (3) TTTCCACCTC (2)
| 3.6 | 0.0036 |
| P0.5 retina | AAAGTTATTT (3) CTGGGCTTGA (2) TTTCCACCTC (2)
| 25.5 | 0.0255 |
| P2.5 retina | CTGGGCTTGA (2) GGGGGGGGGG TTTCCACCTC (2)
| 14.1 | 0.0141 |
| P4.5 retina | CTGGGCTTGA (2) GGGGGGGGGG
| 11.9 | 0.0119 |
| P6.5 retina | CTGGGCTTGA (2) GGGGGGGGGG TTTCCACCTC (2)
| 8.3 | 0.0083 |
| P10.5 crx- retina | CTGGGCTTGA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GGGGGGGGGG
| 9.6 | 0.0096 |
| Adult retinal | CTGGGCTTGA (2) GGGGGGGGGG TTTCCACCTC (2)
| 14.9 | 0.0149 |
| ONL | GGCCACCTGG (2) GGGGGGGGGG TTTCCACCTC (2)
| 15.3 | 0.0153 |