| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCTGGATT (2) CCTTTAATCC (3)
| 55.5 | 0.0555 |
| Cb medulloblastoma | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 46.2 | 0.0462 |
| P8 GC+1d culture | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 39.9 | 0.0399 |
| P8 GC+SHH+1d culture | AAGCTGGATT (2) CCTTTAATCC (3)
| 28.1 | 0.0281 |
| 3T3 fibroblasts | CCTTTAATCC (3)
| 70.1 | 0.0701 |
| E15 cortex | AAGCTGGATT (2) CCTTTAATCC (3)
| 59.3 | 0.0593 |
| P1 cortex | AAGCTGGATT (2) CCTTTAATCC (3) TCTGCTGATG (6)
| 163.5 | 0.1635 |
| Hypothalamus | CCTTTAATCC (3)
| 19.9 | 0.0199 |
| E12.5 retina | AAGCTGGATT (2) CCTTTAATCC (3) TCTGCTGATG (6)
| 80.8 | 0.0808 |
| E14.5 retina | AAGCTGGATT (2) CCTTTAATCC (3)
| 122.1 | 0.1221 |
| E16.5 retina | AAGCTGGATT (2) CCTTTAATCC (3)
| 74.2 | 0.0742 |
| E18.5 retina | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 27.2 | 0.0272 |
| P0.5 retina | AAGCTGGATT (2) CCTTTAATCC (3)
| 78.5 | 0.0785 |
| P2.5 retina | AAGCTGGATT (2) CCTTTAATCC (3)
| 72.2 | 0.0722 |
| P4.5 retina | AAGCTGGATT (2) CCTTTAATCC (3) TCTGCTGATG (6)
| 51.5 | 0.0515 |
| P6.5 retina | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 76.6 | 0.0766 |
| P10.5 crx- retina | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 67 | 0.067 |
| P10.5 crx+ retina | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 48 | 0.048 |
| Adult retinal | AAGCTGGATT (2) CCTTTAATCC (3) GGAAACCCTG
| 133.4 | 0.1334 |
| ONL | AAGCTGGATG CCTTTAATCC (3) GGAAACCCTG
| 90 | 0.09 |