| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACGTCTCCAT ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT
| 127.2 | 0.1272 |
| Cb medulloblastoma | ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2)
| 36.9 | 0.0369 |
| P8 GC+1d culture | ACGTCTCCAT AGCAGATGTG ATGATGATGA (2) CAGACAAAGC CAGCATCACC CAGCTTCACC (2) CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT TCCTAAGGAA
| 102.5 | 0.1025 |
| P8 GC+SHH+1d culture | ACGTCTCCAT ATGATGATGA (2) CAGCATCACC CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT TCCTAAGGAA
| 148.8 | 0.1488 |
| 3T3 fibroblasts | CAGACAAAGC CAGCATCACC
| 35 | 0.035 |
| E15 cortex | CAGCATCACC CATTTGAAGC CTCAGCTTTT
| 79.1 | 0.0791 |
| P1 cortex | CAGACAAAGC CAGCATCACC CCTGTGATCC (2)
| 36.3 | 0.0363 |
| Hypothalamus | CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2)
| 45.3 | 0.0453 |
| E12.5 retina | ACGTCTCCAT ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT TCCTAAGGAA
| 182.2 | 0.1822 |
| E14.5 retina | AAGGGGTCAT ACGTCTCCAT ATGATGATGA (2) CAGACAAAGC CAGCATCACC CAGCATCCCC (2) CATTTGAAGC GGCCCAAAAA GTAATGGGAT TCCTAAGGAA
| 118.2 | 0.1182 |
| E16.5 retina | AAGGGGTCAT ACGTCTCCAT AGCAGATGTG ATGATGATGA (2) CAGACAAAGC CAGCATCACC CAGCTTCACC (2) CATTTGAAGC CCTGTGATCC (2) GTAATGGGAT TCCTAAGGAA
| 115.8 | 0.1158 |
| E18.5 retina | ACGTCTCCAT ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC GTAATGGGAT
| 178.3 | 0.1783 |
| P0.5 retina | AGCAGATGTG ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2) TCCTAAGGAA
| 86.4 | 0.0864 |
| P2.5 retina | ACGTCTCCAT ATGATGATGA (2) CAGACAAAGC CAGCATCACC CAGCATCCCC (2) CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT TCCTAAGGAA
| 179.6 | 0.1796 |
| P4.5 retina | AAGGGGTCAT ACGTCTCCAT CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2)
| 125 | 0.125 |
| P6.5 retina | ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT
| 100.1 | 0.1001 |
| P10.5 crx- retina | AAGGGGTCAT ACGTCTCCAT CAGACAAAGC CAGCATCACC CATTTGAAGC CCTGTGATCC (2) CTCAGCTTTT GTAATGGGAT
| 61.4 | 0.0614 |
| P10.5 crx+ retina | CAGACAAAGC CAGCATCACC CAGCATCCCC (2) CCTGTGATCC (2) CTCAGCTTTT
| 99.9 | 0.0999 |
| Adult retinal | CAGACAAAGC CAGCATCACC CAGCTTCACC (2) CATTTGAAGC CCTGTGATCC (2) GGCCCAAAAA
| 63.1 | 0.0631 |
| ONL | ATGATGATGA (2) CAGACAAAGC CAGCATCACC CATTTGAAGC CTCAGCTTTT GGCCCAAAAA
| 34.4 | 0.0344 |