| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGAGGTAGT TTTTCAATTC (2)
| 13.1 | 0.0131 |
| Cb medulloblastoma | ACTTGAAAAA CTGAGGTAGT TGGTGCACCT (3) TTTTCAATTC (2)
| 20.8 | 0.0208 |
| P8 GC+1d culture | ACTTGAAAAA CTGAGGTAGT GGGCCCAAGC (3) TTAGGATCCT TTTTCAATTC (2)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AGAGAGAGGA (2) ATCTTTTAAA CTGAGGTAGT TTAGGATCCT TTTTCAATTC (2)
| 15.2 | 0.0152 |
| 3T3 fibroblasts | AGAGAGAGGA (2)
| 3.5 | 0.0035 |
| P1 cortex | TTTTCAATTC (2)
| 9.1 | 0.0091 |
| Hypothalamus | CTGAGGTAGT
| 7.2 | 0.0072 |
| E12.5 retina | CTGAGGTAGT TTAGGATCCT TTTTCAATTC (2)
| 11.3 | 0.0113 |
| E14.5 retina | CTGAGGTAGT TTAGGATCCT TTTTCAATTC (2)
| 18.1 | 0.0181 |
| E16.5 retina | CTGAGGTAGT
| 12.7 | 0.0127 |
| E18.5 retina | ACTTGAAAAA CTGAGGTAGT TTAGGATCCT TTTTCAATTC (2)
| 14.5 | 0.0145 |
| P0.5 retina | ACTTGAAAAA CTGAGGTAGT GGGCCCAAGC (3) TTTTCAATTC (2)
| 17.8 | 0.0178 |
| P2.5 retina | CTGAGGTAGT TTTTCAATTC (2)
| 12.3 | 0.0123 |
| P4.5 retina | AAAGGGGGAA CTGAGGTAGT TTTTCAATTC (2)
| 11.9 | 0.0119 |
| P6.5 retina | CTGAGGTAGT TTTTCAATTC (2)
| 8.3 | 0.0083 |
| P10.5 crx- retina | TGGTGCACCT (3)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | AAAGGGGGAA ACTTGAAAAA TTAGGATCCT TTTTCAATTC (2)
| 7.6 | 0.0076 |
| Adult retinal | CTGAGGTAGT TTTTCAATTC (2)
| 16.7 | 0.0167 |
| ONL | AAAGGGGGAA ACTTGAAAAA ATCTTTTAAA CTGAGGTAGT TTTTCAATTC (2)
| 13.3 | 0.0133 |