| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATCATCTGT (2) CAGGAGCAGA (3) GGAACCAGAA (2) TTGTTACTGC (2)
| 8.1 | 0.0081 |
| Cb medulloblastoma | GGAACCAGAA (2) TTGTTACTGC (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | TATATGTATG (2) TGCTACCACT TTGTTACTGC (2)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | TATATGTATG (2) TGCGTGTGTG (4) TTGTTACTGC (2)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | CAGGAGCAGA (3) TGCGTGTGTG (4) TTGTTACTGC (2)
| 14 | 0.014 |
| P1 cortex | TTGTTACTGC (2)
| 9.1 | 0.0091 |
| E12.5 retina | CAGGAGCAGA (3)
| 1.9 | 0.0019 |
| E14.5 retina | AATCATCTGT (2) TGCGTGTGTG (4)
| 3.6 | 0.0036 |
| E16.5 retina | TATATGTATG (2)
| 1.8 | 0.0018 |
| E18.5 retina | CCTATTTTTC TTGTTACTGC (2)
| 3.6 | 0.0036 |
| P0.5 retina | CCTATTTTTC TGCGTGTGTG (4) TGCTACCACT
| 6 | 0.006 |
| P2.5 retina | TATATGTATG (2) TGCGTGTGTG (4) TGCTACCACT
| 5.4 | 0.0054 |
| P6.5 retina | TGCGTGTGTG (4)
| 1.7 | 0.0017 |
| P10.5 crx- retina | AATCATCTGT (2) GGAACCAGAA (2) TTGTTACTGC (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CAGGAGCAGA (3) TGCTACCACT TTGTTACTGC (2)
| 7.6 | 0.0076 |
| Adult retinal | AATCATCTGT (2) CCTATTTTTC
| 5.6 | 0.0056 |
| ONL | CCTATTTTTC TGCGTGTGTG (4)
| 5.7 | 0.0057 |